Template-based Modeling Results for YFEX_ECOLI

Submitted Primary Sequence

>Length 299
MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMVIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMVIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL
CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCEEEECCCCCCCCEEEEHHHHHHCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCEECCCEEEEECCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMVIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL
54322111133312000000010223231022003100210120333123220000000023003201222113312312211312023231000000001312000100110031013102001102012211320011012013112233123200002222222000000010111032024122310120012233232302233313201112022433241120011101112222210000000012132012101211222313200013002012000000001321322
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMVIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL
1	MUSTER	3qnrA	0.313	0.993	3.408	threading_1	L--APQAVLTPPSAASLFLVLVAGDSRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPVAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVDGTENPTDDDAADSALIGEDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIVDDGVEHDILRDNMAFGSGEAEYGTYFIGYAKDPAVTELMLRRMFLEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL
2	SPARKS	3veca	0.311	1.000	6.796	threading_2	ARLAPQAVLTPPSAASLFLVLVAGDSRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPSAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVAGTENPTDDDAADSALIGDDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIVDDGVEHDILRDNMAFGSGEAEYGTYFIGYAKDPAVTELMLRRMFGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL
3	PROSPECT2	3qnrA	0.308	1.000	5.264	threading_3	ARLAPQAVLTPPSAASLFLVLVAGDSRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPVHPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVDGTENPTDDDAADSALIGDEDDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIDDDGVEHDILRDNMAFGLGEAEYGTYFIGYAKDPAVTELMLRRMFGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL
4	PPA-I	3qnrA	0.308	1.000	7.412	threading_4	ARLAPQAVLTPPSAASLFLVLVAGDSRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPVHPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVDGTENPTDDDAADSALIGEDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIDDDGVEHDILRDNMAFGLGEAEYGTYFIGYAKDPAVTELMLRRMFLEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL
5	HHPRED-l	2iiz_A	0.382	0.953	6.961	threading_5	-PREQLGVCAEGNLHSVYL-FNANDNESQLRPCIANVAQYIYELTDQYSDSAFNGFVAIGANYWDSLYPESRPE-LKPFPA-QEGEAPAIEYDLFVHLRCDRYDILHLVANEISQ-FEDLVELVEEERGFRF-DSRDLTGFVDGTENPKGRHRQEVALVGEDPEFKGGSYIHVQKYAHNLSKWHRLPLKKQEDIIGRTKQDNIEYESEDKPLTSHIKRVNLKDNGKSIEILRQS-PYGSL-KEQGL-FISTCRTPDHFEK-LHS-VGDGAGNHDHL-HFTSALTGSSFFAPSLDFL-Q-
6	HHPRED-g	2iiz_A	0.381	0.957	6.093	threading_6	-PREQLGVCAEGNLHSVYL-FNANDNESQLRPCIANVAQYIYELTDQYSDSAFNGFVAIGANYWDSLYPESRPE-LKPFPA-QEGEAPAIEYDLFVHLRCDRYDILHLVANEISQ-FEDLVELVEEERGFRF-DSRDLTGFVDGTENPKGRHRQEVALVSEDPEFKGGSYIHVQKYAHNLSKWHRLPLKKQEDIIGRTKQDNIEYESEDKPLTSHIKRVNLKDNGKSIEILRQS-PYGSLK-EQGL-FISTCRTPDHFEK-LHS-VGDGAGNHDHL-HFTSALTGSSFFAPSLDFL-QF
7	SP3	3veca	0.313	0.993	6.601	threading_7	L--APQAVLTPPSAASLFLVLVAGDSRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPSAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVAGTENPTDDDAADSALIGEDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIVDDGVEHDILRDNMAFGSGEAEYGTYFIGYAKDPAVTELMLRRMFGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL
8	SAM-T99	3qnrA	0.311	1.000	6.861	threading_8	ARLAPQAVLTPPSAASLFLVLVAGDDRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPVHPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVDGTENPTDDDAADSALIDEDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIVDDGVEHDILRDNMAFGSLGAEYGTYFIGYAKDPAVTELMLRRMFGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL
9	MUSTER	2hagA	0.340	0.973	3.114	threading_9	NPREQLGVCAEGNLHSVYLFNANDNVESQLRPCIANVAQYIYELTDQYSDSAFNGFVAIGANYWDSLYPESRP-ELKPFPAQEGREAPAIEYDLFVHLRCDRYDILHLVANEISQF-EDLVELVEEERGFRF-DSRDLTGFVDGTENPKGRHRQEVALVGEDPEFKGGSYIHVQKYAHNLSKWHRLPLKKQEDIIGRTKQDNIEYESEDKPLTSHIKRVNLKDENGKSIEILRQSPYGS--LKEQGLFISTCRTPDHFEK-LHSVFGDGAGNHDHL-HFTSALTGSSFFAPSLDFL-QF
10	SPARKS	3qnra	0.314	1.000	6.734	threading_10	ARLAPQAVLTPPSAASLFLVLVAGDSRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPSAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVDGTENPTDDDAADSALIGDDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIVDDGVEHDILRDNMAFGSGEAEYGTYFIGYAKDPAVTELMLRRMFGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL

Predicted Tertiary Structure


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TM-score=0.910 to 2gvkA SCOP code=d.58.4.14	TM-score=0.910 to 2gvkA SCOP code=d.58.4.14	TM-score=0.911 to 2gvkA SCOP code=d.58.4.14	TM-score=0.907 to 2gvkA SCOP code=d.58.4.14	TM-score=0.905 to 2gvkA SCOP code=d.58.4.14