Template-based Modeling Results for YFEW_ECOLI

Submitted Primary Sequence

>Length 434
MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK
42200100000000000002322212311233122223102201300221032211000000022210001200000222322222333241231100000000210000000010122121302230020002023223321414320200000200010111121223212222223221200200331213131022000000000000100110232202200120013101122011112242132320011222222331213123122222202122331111110101101000001000100100022122221201213002111122233111000000102221121102101221100101000000000232000000012212222213311110221211010011002101212345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK
1	MUSTER	1ci8A	0.209	0.836	2.452	threading_1	-----------------------------------AASLAARLDAVFDQALRERLVGAVAIVARHGEILYRRAQGLAD-------REAGRPMREDTLFRLASVT-KPIVALAVLRLVARGELALDAPVTRWLPEFRPRLAD--GSEPLVTIHHLLTHTSGLGYWLLEGAGSDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYS-LALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPG-----FLPETLADAARRDQAGVRGPGWGFGYLSAVLDDPAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSG---------------PLTIALRDAVYA-----
2	SPARKS	1ci9a	0.212	0.836	4.848	threading_2	-----------------------------------AASLAARLDAVFDQALRERLVGAVAIVARHGEILYRRAQGLADREAG-------RPMREDTLFRLASV-TKPIVALAVLRLVARGELALDAPVTRWLPEFRPRLAD--GSEPLVTIHHLLTHTSGLGYWLLEGAGSDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYSL-ALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPG-----FLPETLADAARRDQAGAETRGPGWGFGYLSDDPAAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGP---------------LTIALRDAVYA-----
3	PROSPECT2	3hl9A	0.177	0.818	4.184	threading_3	-----------------------------------AADPVVLMETAFRKAVKSRIPGAVIMARASGNLNYTRCFGARTVRRDEN--NQLPPLQVDTPCRLASATKLL-TTIMALQCMERGLVDLDETVDRLLPDLDAGNARLRERRGKITLRHLLTHTSGLSYVHPLLREYMAQGHLQSAEKFGIQSRLAPPAVNDPGAEWIYGA-NLDWAGKLVERATGLDLEQYLQENICAPLGITDMTFKLQQRPDMLARRADQTHRNSADGRLRY-----------------------DCFGGQGVFSGPGSYMKVLHSLLKRDG----LLLQPQTVDLMFQPALESPHINYGGPMPMVLLEDLDGENWRRKGSLTFGGGPNIVWQIDPKAGLCTLAFFQLEPWND-------------PVCRDLTRTFEHAIYAQYQQG
4	PPA-I	1ci8A	0.204	0.834	3.999	threading_4	-----------------------------------AASLAARLDAVFDQALRERLVGAVAIVARHGEILYRRAQGLADREAG-------RPMREDTLFRLASVT-KPIVALAVLRLVARGELALDAPVTRWLPEFRPRLAD--GSEPLVTIHHLLTHTSGLGYWLLEGGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYS-LALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGF-----LPETLADAARRDQAGVETRGPGWGFGYLSDDPAAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTILRDAVYA---------------------
5	HHPRED-l	1ci9_A	0.218	0.823	4.160	threading_5	------------------------------------AASLARLDAVFDQALRERLVGAVAIVARHGEILYRRAQGLADR-------EAGRPMREDTLFRLASVTKPI-VALAVLRLVARGELALDAPVTRWLPEFRPRLAD--GSEPLVTIHHLLTHTSGLGYWLLEGAGSDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYSL-ALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEP----ERFAVPYHDGQPEPVRMRDPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPG-----FLPETLADAARRDQAGGPGWGFGYLSAVLDDP-AAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSG---------------PLTIALRDAVYA-----
6	HHPRED-g	1ci9_A	0.217	0.818	3.669	threading_6	------------------------------------AASLARLDAVFDQALRERLVGAVAIVARHGEILYRRAQGLADRE-------AGRPMREDTLFRLASVTKPI-VALAVLRLVARGELALDAPVTRWLPEFRPRL--ADGSEPLVTIHHLLTHTSGLGYWLLEDRLGISDDLRDFDLDENLRRLASAPLSFAPGSGWQYS-LALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEP----ERFAVPYHDGQPEPVRMRDGLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPG-----FLPETLADAARRDQAGGPGWGFGYLVLDDPAA---AGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGP---------------LTIALRDAVYA-----
7	SP3	1ci9a	0.212	0.836	4.413	threading_7	-----------------------------------AASLAARLDAVFDQALRERLVGAVAIVARHGEILYRRAQGLADREAG-------RPMREDTLFRLASVTKPIVALAVLRLVA-RGELALDAPVTRWLPEFRPRLAD--GSEPLVTIHHLLTHTSGLGYWLLEGAISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYSL-ALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANP-----GFLPETLADAARRDQAGAETRGPGWGFGYLSDDPAAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGP---------------LTIALRDAVYA-----
8	SAM-T99	1ci8A	0.215	0.804	4.506	threading_8	-------------------------------------SLAARLDAVFDQALRERLVGAVAIVARHGEILYRRAQGLAD-------REAGRPMREDTLFRLASVTKPI-VALAVLRLVARGELALDAPVTRWLPEFRPRLADGEP---LVTIHHLLTHTSGLGYWLLEGGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYS-LALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAE----PERFAVPYHDGQPEPVRMEGHGAAVRFAPSRVFEPGAY-----PSGGAGMYGSADDVLRALEAIRAN------PGFLPETLADAARRDQAGPGWGFGYLSAVLDDPAAAGTPQ-HAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTIALRDAVYA--------------------
9	MUSTER	2efxA	0.169	0.806	2.242	threading_9	------------------------------------SDLNNAIQGILDDHVARGVVGVSLALCLPGEETSLYQSGYADK-------FNKMPMTGDHLFRIASCTKSFIATGLHLLVQD-GTVDLDEPITRWFPDL--------PKAAQMPVRILLNHRSGLPD---FETSMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYVLAGMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDSTE-WFPLSGANAAGDMVSTPRDIVKFLNALFDGR------ILDQKRLWEMKDNISNTVANGHGLLL----------MRYGSSELKGHLGQIPSIMGRDEETGAALMLIQNSGAGDFES------------FYLKGVNEPVDRVLEAIKNS
10	SPARKS	3tg9a	0.169	0.735	4.478	threading_10	------------------------------------------MKNHLHTIMEDWKLSGTALMKKGEDIPFIASLGFANR-------AERIPNEHHTRFGIASGC-KLFTAIAICQLVEAGKLSFDTPLSDWLD----------APFPNVTIHHLLTHTSGVPDYFDEDLWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHRFHYNNAGFILLGLVVESVSGVTFQEYVEANVFQRAGMHESGYFAFDTLPAKTALGYIDLED------------------GSWKTNL-YSLPVIGGSDGGAYVTAEDMMKLWLALMRH------ELLNETYTQKLLTPHEDDDYYGYGVWIKQQDGAISKYHVMGYDPGVC------FHSAFYPTSNGIVVVCAN-----QSSGAYDVMAAIEALF-------------------

Predicted Tertiary Structure


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TM-score=0.895 to 1ci8A SCOP code=e.3.1.1	TM-score=0.888 to 1ci8A SCOP code=e.3.1.1	TM-score=0.893 to 1ci8A SCOP code=e.3.1.1	TM-score=0.728 to 1ci8A SCOP code=e.3.1.1	TM-score=0.891 to 1ci8A SCOP code=e.3.1.1