Template-based Modeling Results for YFES_ECOLI

Submitted Primary Sequence

>Length 244
MKKRFIYHDEKSNKFWWIDYEGDSLAVNYGKVGSIGKFQTKEFDNEEQCLKEASKLIAAKMKKGYQEDPKFNFMDRYYFDDEEIGLHVKTSHPNFQCHFTDPLYMCCWDEESPFGSDEGADALNVLENSLRKEPDLDCADFPQMLIETMWGMKYIAMDSILEEDVRAQLLVDEMSTIQSNMITYATAFGQIKVMGKISHKLKKMGLNALARHQLTAKILQWGDGQDSPILQKMIDDLTAFPHEN
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKRFIYHDEKSNKFWWIDYEGDSLAVNYGKVGSIGKFQTKEFDNEEQCLKEASKLIAAKMKKGYQEDPKFNFMDRYYFDDEEIGLHVKTSHPNFQCHFTDPLYMCCWDEESPFGSDEGADALNVLENSLRKEPDLDCADFPQMLIETMWGMKYIAMDSILEEDVRAQLLVDEMSTIQSNMITYATAFGQIKVMGKISHKLKKMGLNALARHQLTAKILQWGDGQDSPILQKMIDDLTAFPHEN
CCEEEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKRFIYHDEKSNKFWWIDYEGDSLAVNYGKVGSIGKFQTKEFDNEEQCLKEASKLIAAKMKKGYQEDPKFNFMDRYYFDDEEIGLHVKTSHPNFQCHFTDPLYMCCWDEESPFGSDEGADALNVLENSLRKEPDLDCADFPQMLIETMWGMKYIAMDSILEEDVRAQLLVDEMSTIQSNMITYATAFGQIKVMGKISHKLKKMGLNALARHQLTAKILQWGDGQDSPILQKMIDDLTAFPHEN
4321010234412100102022110000103112212221220322320132012101211531133323231234212323321022310122002102320000011230111132001001102201452331300200200021121131121322232102121233311112001000000002010102004301310020010120002013123233220022002102213444
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKRFIYHDEKSNKFWWIDYEGDSLAVNYGKVGSIGKFQTKEFDNEEQCLKEASKLIAAKMKKGYQEDPKFNFMDRYYFDDEEIGLHVKTSHPNFQCHFTDPLYMCCWDEESPFGSDEGADALNVLENSLRKEPDLDCADFPQMLIETMWGMKYIAMDSILEEDVRAQLLVDEMSTIQSNMITYATAFGQIKVMGKISHKLKKMGLNALARHQLTAKILQWGDGQDSPILQKMIDDLTAFPHEN
1	MUSTER	2ra8A	0.221	0.947	0.950	threading_1	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEEVVEAKKYALSEGVNLDKILKDKKLPSL--KQITIGWGYE-----GEDCSDIADGIVENKEKFAHFEGL-FWGDIDFEEQEISWIEQVD-LSPVLDAPLLNGTNNLSIGK--KPRPNLKSLEIIGGLPDSVVEDILGSLEKLVLFRPLFSKDRFPNLKWL-EEQNVVVEFLESD
2	SPARKS	2ra8a	0.218	0.959	2.439	threading_2	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEEVAKEKVEAKKYALSYDEAEEGVNLDKILKDK-KLPSLKQGWGYEGEDCSDIADGIVENKEKFAHF------EGLFWGDIDFEEQEISWIEQVDLSPVLDAPLLNNLTNNLSIGKKNLKSLEISGGLPDSVVEDILGSLEKLVLYVGVEDYGFDGDNVFRPLFSKDR--FPNLK
3	PROSPECT2	2ra8A	0.216	0.967	1.398	threading_3	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEEVAKEKVEAKKYALSYDEAEEGVNLDKILKDKITIGWGYE-----GEDCSDIADGIVENKEKFAHFEQVDLSPVLDKGTNNLSIGKKPDSVVEDILGSDLPNFDGDNVFRPLFSKDRFPNLKWAGVLTDEGARLLLDHVDKIKHLKFINKYNYLSDEK--KELQKSLPKTELEH
4	PPA-I	2ra8A1	0.446	0.303	2.170	threading_4	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEEVAKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	2ra8_A	0.228	0.918	5.678	threading_5	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEVVEAKKYALSYDE----AEEGVNL-DKILKDKITIG-W------GYEEDCDIADGIVENKEKFAHFEWGEDLSPVLDA-PLLSIGKKPGLPDSVVEDILLVVDGD-NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVE-FLESDILPQL-DISAGVLTDESDE-KKELQKLP-K-
6	HHPRED-g	2ra8_A	0.214	0.959	4.900	threading_6	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEVAKE-KVEAKKYALSYEAEEGVNL-DKILKDKKQITIG-WG-YEGEDCS-DIADGIVENKEKFAHFEWGDILSPVLDA-PLLKIKGTNNLPDSVVEDILLPKLVYDYGFDGD-SKDRFPNLKWLGIVDAEEQNVVVE-FLESDILPQLISAGV-LTDEGARLLLDHVDKIKHLN
7	SP3	2ra8a	0.230	0.996	1.995	threading_7	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEKVEAKKYALSYDEAEKKLPSLKDIADGIVENGLFWDIDFEEQEIVDLSPVLDAPLLNNSIGKKPRPNLKSLPDSVVEDILGSDYVGVEDDGDNVFRPLFSKDRFPNLKQNVVVEFLELPQLETDGVLTDEGARLLLDHVDKIKHLKFINKYNSDEKKELQKSLVSDSQEYPITE
8	SAM-T99	2ra8A	0.229	0.893	5.475	threading_8	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETEKVEAKKYLSYDEAEEGVNLDKILKDKKLPSLKQITIGWGY--------EGEDCSDIADGIVE-----NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAPLL------------NNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGV
9	MUSTER	2ra8A1	0.446	0.303	0.888	threading_9	-KRVFVFQDFKSQKFWSIDVRGTDVIVNYGKLGTDGQTQVKNFSSAGEAEKAAGKLIAEKTKKGYVETLEEVAKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	2eoca	0.217	0.340	1.168	threading_10	YNCTLNQTNIENNKFYIIQLLQDTCWNRWGRVGEVGQSKINHFTRLEDAKKDFEKKFREKTKNNWAERDHFVSHPGKYIEVQA-----------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.510 to 1dfjI SCOP code=c.10.1.1	TM-score=0.500 to 1h6uA SCOP code=b.1.18.15	TM-score=0.510 to 1dfjI SCOP code=c.10.1.1	TM-score=0.422 to 1lrvA SCOP code=a.118.1.5	TM-score=0.366 to 2fblB SCOP code=d.63.1.2