Template-based Modeling Results for YFDX_ECOLI


  Submitted Primary Sequence

>Length 211
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN
4432100000000000000000210212132122212212211120220032012002101001110222223302300220021023122111310331441323311000010100012212112312200220232123123300021021021101000110103302200110131034422130120022023001000110236
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN
1MUSTER3dzaA0.5570.8342.285threading_1-----------------------------APAAAATTQVQKEAADVLQVA-VQGANARDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAK-IADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQ-YLPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSELV---
2SPARKS3dzaa0.5850.8344.536threading_2-----------------------------APAAAATTQVQKEAADVLQVAVQGANA-RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAKI-ADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYL-PLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSELV---
3PROSPECT23dzaA0.5570.8342.559threading_3APA-----------------------------AAATTQVQKEAADVLQVAVQGANA-RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAK-IADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGV-IENQYLPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSE---LV
4PPA-I3dzaA0.5510.8342.654threading_4-----------------------------APAAAATTQVQKEAADVLQVA-VQGANARDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAK-IADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGVIEN-QYLPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSELV---
5HHPRED-l3dza_A0.6090.82510.197threading_5------------------------APAAAATTQ-----VQKEAADVLQVAVQGANA-RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAK-IADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYL-PLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSE-----
6HHPRED-g3dza_A0.5920.8259.231threading_6---------------------------APAAAATTQ--VQKEAADVLQVAVQGANA-RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAK-IADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYL-PLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSE-----
7SP33dzaa0.5850.8341.693threading_7-----------------------------APAAAATTQVQKEAADVLQVAVQGANA-RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAKI-ADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYL-PLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSELV---
8SAM-T993dzaA0.5970.8346.667threading_8--------------------------APAAAATTQVQ---KEAADVLQVAVQGANA-RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAK-IADRYVIINASIALSEDYVATPEKESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQY-LPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSELV---
9MUSTER3dzaA20.5150.6451.276threading_9-----------------------------APAAAATTQVQKEAADVLQVA-VQGANARDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAKI-ADRYVIINASIA----------------------------------------VIENQY-LPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSELV---
10SPARKS3snxa0.1390.9530.633threading_10AERLFNGAWYNLFIGYRALQCQDDASDVVSRPKYGFNSSYQAIPSDGRTSFAWYLIYKTIDNCNTAISIGDSEELRQAQGQALALRAFCYLHLVQYQFTYLKDKDAPC--VPIYTEPTTSGTKPKG---KSTVAQVYQQIFD-DLNLAQDYLTNYVRKGDGQKFKP----NTDVVNGARAYLLTGQWGEAAKAAEAARKGYSLTTTAEYEG

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.502 to 1cpqA
SCOP code=a.24.3.2
TM-score=0.522 to 1qqeA
SCOP code=a.118.8.1
TM-score=0.522 to 1qqeA
SCOP code=a.118.8.1
TM-score=0.523 to 1qqeA
SCOP code=a.118.8.1
TM-score=0.505 to 1elwA
SCOP code=a.118.8.1