Template-based Modeling Results for YFDR_ECOLI

Submitted Primary Sequence

>Length 178
MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA
CCHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA
4210111112101232013320101000000010020121021110001100000210231000000001022000221100022002102301310110013202022222310210020000010130023312101212213113223010001210001002102202323324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA
1	MUSTER	2gz4A	0.281	1.000	2.788	threading_1	RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRHAFTVAQHCLIVETIFTPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPPHAKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPTRDMFDIIPLPSTEAQRLFIARFEAIETLRVTR
2	SPARKS	2gz4a	0.281	1.000	5.743	threading_2	RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTDHAFTVAQHCLIVETIFTPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPPHAKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRRDMFDIIPLPSTEAQRLFIARFEAIETLRVTR
3	PROSPECT2	2gz4A	0.281	1.000	2.423	threading_3	SAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRHAFTVAQHCLIVETIATPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPPHASREIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITFDIIPLPSTEAQRLFIARFEAIETLRTGG
4	PPA-I	2gz4A	0.281	1.000	3.669	threading_4	RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTDHAFTVAQHCLIVETIFTPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPPHAKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRRDMFDIIPLPSTEAQRLFIARFEAIETLRVTR
5	HHPRED-l	2gz4_A	0.288	0.994	10.527	threading_5	RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRHAFTVAQHCLIVETIFTPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPPHASDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRRDMFDIIPLPSTEAQRLFIARFEAIETLRVT-
6	HHPRED-g	2gz4_A	0.281	1.000	9.434	threading_6	RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRHAFTVAQHCLIVETIFTPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPPELKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRRDMFDIIPLPSTEAQRLFIARFEAIETLRVTR
7	SP3	2gz4a	0.281	1.000	5.123	threading_7	RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTDHAFTVAQHCLIVETIFTPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPPHAKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPTRDMFDIIPLPSTEAQRLFIARFEAIETLRVTR
8	SAM-T99	2gz4A	0.257	0.961	5.807	threading_8	RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRGDFTVAQHCLIVEPGATPDEMQMALLHDAPEYVIGDMISPFKSVVGGYKTVEKRLEAAVHLRFGLPRELKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRDIIPLPSTEAQRLFIARFEAI-------
9	MUSTER	2parB	0.184	0.826	1.085	threading_9	-------------------KQSHFFAHLSRLKLINRWPLMNVRTENVSEHSLQVAMVAAERIALLAMYHDASAVLTGDLPTPAQEYKAIEKIAQQKLVDMVRDIFAYSDEEKSLVKQADALCAYLKCLEELAGNNEFLLAKTRLEATLEAR-----RSQEMDYFMEIFVP-------S
10	SPARKS	1wpha	0.153	0.843	1.819	threading_10	LKLINRWPLRNVRTENVSEHSLQVAVAHALAAIKNRKFGG---------------NVNAERIALLA-YHDASEVLTGDLPTPQEYKAIEKIAQQKLVDAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAGNNEFLLAKTRLEATLEAR---RSQEDYFEIFVPSFH---------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.920 to 2gz4A SCOP code=a.211.1.1	TM-score=0.918 to 2gz4A SCOP code=a.211.1.1	TM-score=0.925 to 2gz4A SCOP code=a.211.1.1	TM-score=0.918 to 2gz4A SCOP code=a.211.1.1	TM-score=0.925 to 2gz4A SCOP code=a.211.1.1