Template-based Modeling Results for YFCR_ECOLI

Submitted Primary Sequence

>Length 170
MTGGVMSQKFVVGAGLLVCSVCSLSAMAGSKPVDLILRVLVDAPPPCSIKGSQVEFGNMIADNVDGTNYRQDAKYTLNCTNSLANDLRMQLKGNTSTINGETVLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVPVKASGAQLAAGEFNASLTMVVDYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTGGVMSQKFVVGAGLLVCSVCSLSAMAGSKPVDLILRVLVDAPPPCSIKGSQVEFGNMIADNVDGTNYRQDAKYTLNCTNSLANDLRMQLKGNTSTINGETVLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVPVKASGAQLAAGEFNASLTMVVDYQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEECCCEEECCEEEEEEECCEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCEECCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTGGVMSQKFVVGAGLLVCSVCSLSAMAGSKPVDLILRVLVDAPPPCSIKGSQVEFGNMIADNVDGTNYRQDAKYTLNCTNSLANDLRMQLKGNTSTINGETVLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVPVKASGAQLAAGEFNASLTMVVDYQ
55310111110000000000000000001132110002010102110102312011020001102222021102010201322222020102012221313100102121000100212322102113222010123331201000022222302302010101010124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTGGVMSQKFVVGAGLLVCSVCSLSAMAGSKPVDLILRVLVDAPPPCSIKGSQVEFGNMIADNVDGTNYRQDAKYTLNCTNSLANDLRMQLKGNTSTINGETVLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVPVKASGAQLAAGEFNASLTMVVDYQ
1	MUSTER	2j2zB	0.185	0.794	1.784	threading_1	---------------------------------RAAFHGEVVRPA-CTLAMEIIDMGETPVRDLGFSGPERKFSLRLRNCEFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADVRGNIARAGKVMPAIPLTGNEELDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
2	SPARKS	2uy6b	0.213	0.800	2.566	threading_2	---------------------------------KVTFNNTVVDAP-CSISQKSIDFGQLSKSFLGGVSKPMDLDIELVNCDGGKGTVKLAFTGPIVNGHSDELDTNGGTGLAIVVQGAGKNVVFDGSEGDANTLKDGENLHYTAVVKKAVGAAVTEGAFSAVANFNLTYQ
3	PROSPECT2	2w07B	0.271	0.694	1.782	threading_3	N----------------------------------------VYIPPCTIQNIVVDFGNINPEHVDNSRGEVTKTISISCPYG---SLWIKVTGNTMGGGQNNVLATNITHFGIALYQGK---------GMSTPLTLRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
4	PPA-I	2w07B	0.280	0.694	2.300	threading_4	----------------------------------------NVYIPPCTINNGQVDFGNINPEHVDNSRGEVTKTISISC---PYGSLWIKVTGNTMGGGQNNVLATNITHFGIALYQGKGM---------STPLTLRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
5	HHPRED-l	2w07_B	0.267	0.682	4.271	threading_5	---------------------------------------NVYIPP-CTINNGVVDFGNINPEHVDNSRGEVTKTISISCPY---GSLWIKVTGNTMGGGQNNVLATNITHFGIALYQGKGSTPLTL----------RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIY-
6	HHPRED-g	2w07_B	0.267	0.682	4.189	threading_6	---------------------------------------NVYIPP-CTINNGVVDFGNINPEHVDNSRGEVTKTISIS-CPY--GSLWIKVTGNTMGGGQNNVLATNITHFGIALYQGKGTPLTL-----------RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
7	SP3	2uy6b	0.221	0.800	2.504	threading_7	---------------------------------KVTFNNTVVDAP-CSISQKSIDFGQLSKSFLEGVSKPMDLDIELVNCDITAFKVKLAFTGPIVNGHSDELDTNGGTGLAIVVQGAGKNVVFDGSEGDANTLKDGENLHYTAVVKKAVGAAVTEGAFSAVANFNLTYQ
8	SAM-T99	2w07B	0.282	0.688	2.771	threading_8	---------------------------------------NVYIP-PCTINNGVVDFGNINPEHVDNSRGEVTKTISISCPYG----LWIKVTGNTMGGGQNNVLATNITHFGIALYQGKG---------MSTPLTLRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
9	MUSTER	2uy7B	0.210	0.812	1.741	threading_9	-------------------------------QGKVTFNNTVVDAP-CSISQKSIDFGQLSKSFLGGVSKPMDLDIELVNCDITAGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENLHYTAVVKKAVGAAVTEGAFSAVANFNLTYQ
10	SPARKS	2jmra	0.187	0.818	2.552	threading_10	-----------------------------MADSTITIRGYVRDN-GCSVAAETVDLMENAAKQFNNIGATVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVGLGIQLLNEQQNQIPLNAPSSALSWTTPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ

Predicted Tertiary Structure


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TM-score=0.756 to 2j2zB SCOP code=b.2.3.2	TM-score=0.775 to 2j2zB SCOP code=b.2.3.2	TM-score=0.744 to 2uy7B SCOP code=b.2.3.2	TM-score=0.557 to 1n12A SCOP code=b.2.3.2	TM-score=0.553 to 1pdkB SCOP code=b.2.3.2