Template-based Modeling Results for YFCN_ECOLI

Submitted Primary Sequence

>Length 183
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPPELP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPPELP
CCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPPELP
554433223311200221112122033332233334442232223321222122122223312221323221322323123210220331311030000010111220141002001102434010000000303210132023102313201102202332113000000022333233427
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPPELP
1	MUSTER	3qd7X	0.200	0.683	2.684	threading_1	-------------------------------------------------DTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRNIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
2	SPARKS	3qd7x	0.200	0.683	3.676	threading_2	-------------------------------------------------DTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRNIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
3	PROSPECT2	3qd7X	0.208	0.683	2.176	threading_3	DTL-----QLD--------------------------------------------NFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRDIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
4	PPA-I	3qd7X	0.200	0.683	3.672	threading_4	-------------------------------------------------DTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRNIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
5	HHPRED-l	3qd7_X	0.200	0.683	6.650	threading_5	-------------------------------------------------DTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRNIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
6	HHPRED-g	3qd7_X	0.200	0.683	6.860	threading_6	-------------------------------------------------DTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRNIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
7	SP3	3qd7x	0.200	0.683	3.678	threading_7	-------------------------------------------------DTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRNIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
8	SAM-T99	3qd7X	0.200	0.683	5.592	threading_8	-------------------------------------------------DTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRNIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRK---------
9	MUSTER	2zqeA	0.275	0.437	1.802	threading_9	----------------------------------------------------------------------------------------------VKEVDLRGLTVAEALLEVDQALEEARALGLSTLRLLHGKGTGALRQAIREALRRDKRVESFADAPPGEGGHGVTVVALR---------P
10	SPARKS	2zqea	0.263	0.437	2.703	threading_10	----------------------------------------------------------------------------------------------VKEVDLRGLTVAEALLEVDQALEEARALGLSTLRLLHGKGTGALRQAIREALRRDKRVESFADAPPGEGGHGVTVVALRP---------

Predicted Tertiary Structure


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TM-score=0.520 to 1dcjA SCOP code=d.68.3.3	TM-score=0.523 to 1dcjA SCOP code=d.68.3.3	TM-score=0.520 to 1dcjA SCOP code=d.68.3.3	TM-score=0.520 to 1ln4A SCOP code=d.68.4.1	TM-score=0.520 to 1dcjA SCOP code=d.68.3.3