Template-based Modeling Results for YFCA_ECOLI


  Submitted Primary Sequence

>Length 269
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
45201101110000000000000000000001101000000000001000010100010000000000001002332121110110000000000000000210222002100000000000000013322333433422111100000000000000001000000000000002121110100010010000000000000003000000000000100002000200212133001000000000000100020002101111124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMETFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
1PROSPECT22bkuB20.0920.9291.474threading_1TDTVAETSASISTFVMLQELQSNILTVLAAVIRKSPGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKY------LETFSPYLLKALTAVGFIADISNSLEEDFRRYSDAMMNVLAQM------------ISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVNGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFI-AQVAEDPQLYSEDATSRAAVGLIGDIAAMQFYGQDWVIDYIKRTRSG
2PROSPECT21ejlI0.1231.0001.433threading_2LQATQAARKLPIQFESAWALTNIASGQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLLSTLACGYLRNLTWTLSNLAPPLDAVEQILPTLVSCWAISYLTDGPNERIEKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLFKTQKEAAWAITNYTSGGTVEQIVYLVIIQVILDAISNIFQAAEEKLSIMIEEC
3PROSPECT21ee4a0.0861.0001.426threading_3LSATVKFRQIMLQLEAAWALTNIASAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNANKPSLIRTATWTLSNLCALPTLAKLIDTETLVDACWAISYLAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVILPALRLLLSSPNIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLTKKEACWAISNASSGGLQRPDIIRYLVIIEVTLDALENILKMGEADKEARGLNI
4PROSPECT23a0oA30.0591.0001.397threading_4GEQLSAFADAVAKDPNHCGWAEFYEKSVEPWLETRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLLGYNVRQFAGVTGNGHYQWYFDHIKFYNYGWWDLNFDDLVYRHDYPQV
5PROSPECT21yq7A0.1040.9961.383threading_5EQDFVQHFSQIVRVLTIGDAIARLKEVLEYNAIGGGLTVVVAFRELVQDADSLQRAWTVGWCVELLQAFFLVADYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMA-GIDGEKEHANAKKILLEMGEFFQIQDDYLDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYELPAVFLQYEEDSYSHIMALIEIY
6MUSTER3zuxA0.1430.9070.813threading_6IIMFGMGLTLKPSDILFKHPKVVIIGVIAQFA--MPATAWCLSKLLNLPAEIAVGVILVGCCGGTASNVMTYLARGNV-ALSVAVTSVSTLTSPLLTPAIFLMLAAGMLMSIVKMVLLPIVLGLIVHKVLGS-----------KTEKLTDALPLVS----VAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTLPYDAQKALTIEVGSGLAAALAAAHPVVAVPGALFSVWHNISGSLLATYWAAKA-------
7SPARKS3eqxa0.0900.9520.948threading_7AETLPILKACIPARAALAELKQAGELLPN-----------QGLLINLLPLLEAQGSSEIENIVTTTDKLFQYAQEDSQADPTKEALRYRTALYQCFTQLSNRPLCVTTALEICSTIKSVQDVTSLTNQATGEVQDDVDPLIKAAHYQFEAIHPFIDG--NGRTGRVLNILYLIDQQLLIVAKQDYYRLLLNVTTWQPWIIFILNAWTTHKIAAARELIAHTTEYVRQQLPKIYSHELVQVIFEYCRIQNLVESGRQTASVYLKQLCDIG
8PROSPECT21xm9A0.0781.0001.367threading_8GLTIPKAVQYKYQAIGAYYIQHTCFQAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFQLTGLLWNLSSTDELKEELIADALPVLADNATGCLRNLSSADAGRQTMIDSLMAYVQNCVAASRCDDKLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALSKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTEDILSSACYTVRNLMAAEAARLLLSDMWSS
9PPA-I3zuxA0.1120.9330.851threading_9IIMFGMGLTLKPSDILFKHPKVVIIGVIAQFAIM-PATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAAGMLMSIVKMVLLPIVLGLIVHKVLGS----------KTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-------
10HHPRED-l3o7q_A0.1430.9070.711threading_10LPQFQQAFTLTNFQAGLIQSAPIPAGILMKKLSYKAGYALGAALAEIMNYTLFLGLFIIAAGLGCLTAANPFVTVLGPESSAQTFNSFGAIIAVVFGQSLILSNSVQTPYMIIVAIVLLVALLIMLKPALQSDNHSDAKQGSFSA------------------------SLSRLARIRHWRWVLAQFCYVGAQACWSYLRYAVIGMTAGFALTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFGGHALTLCSAFMI-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.439 to 1j30A
SCOP code=a.25.1.1
TM-score=0.770 to 3ea5B
SCOP code=a.118.1.1
TM-score=0.666 to 1ialA
SCOP code=a.118.1.1
TM-score=0.673 to 1ialA
SCOP code=a.118.1.1
TM-score=0.621 to 1j0nA
SCOP code=a.102.3.2