Template-based Modeling Results for YFBN_ECOLI

Submitted Primary Sequence

>Length 238
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL
4412311331242021102102200330112032013001121010002313022210110021121102200220222112012100332220120021001002112203220101011032013101000000100211113002000001022022102110112002200102121220231132034013331031012102300330131002002210310213334344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL
1	PROSPECT2	2qfcA	0.098	0.945	1.181	threading_1	AEKLSEIKKIRVLVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY-------------QNLYIENAIANIYAENGYLKKGIDLFEQILKEEFDVKVRYNHAKALYLSLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHARL
2	HHPRED-g	2cp9_A	0.236	0.231	1.034	threading_2	KEL---LMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAASGPSSG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SAM-T99	1aipC	0.245	0.412	1.053	threading_3	--QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREARE--------------------------------------------------------------------------------------------GIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHI----------------------------------------------
4	PROSPECT2	1r2fA	0.103	0.975	1.169	threading_4	ISKDLEVWNRLTSNFVPLSNDIPAWQ----TLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQI--ILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALVKAFLCYNANKYEALFPPEMA
5	SAM-T99	1aipC1	0.288	0.218	1.035	threading_5	--QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKAD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RE
6	PROSPECT2	1qqea	0.104	0.966	1.138	threading_6	ISDPVELLFMKLFSGSDSYKFEEAADRLRKELNLAGDSFLK--AADYQKKAGNEDEAGNTKCFKSGGNSVNAVDRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNADLKALDGQYIEASDIYSKLIKSSGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRKWKITILNKIKESIQQQE------DD
7	SAM-T99	1efuB	0.213	0.256	1.020	threading_7	EITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAG--------------------------------------------------------------------------------------------------------------------------------------------NVAADGVIK-------------------------------------
8	PROSPECT2	3kb9A	0.068	0.987	1.138	threading_8	HPYWPKLQELLEKRLMPADKVEEYADGL--CYTDLMAGYPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLHTALDSPGDHLHHEDTLVAGFADSVRRLYAFLPATWNAR-FARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRRLTFDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGLTLEEAIGEVRRRVEECITEFLAVERDALRFADELADGDDRSTPP
9	SAM-T99	1efuB1	0.212	0.218	1.018	threading_9	EITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	PROSPECT2	1t33A	0.111	0.836	1.135	threading_10	MN-----------IPTTTTKGEQAKSQL---IAAALAQFGEYGTRDIAALAGQNIAAIEDLYLAC---AQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILL--------ACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ--------------

Predicted Tertiary Structure


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TM-score=0.531 to 1elwA SCOP code=a.118.8.1	TM-score=0.491 to 1xb2B SCOP code=a.5.2.2	TM-score=0.535 to 1aipC SCOP code=a.5.2.2	TM-score=0.844 to 1uzrB SCOP code=a.25.1.2	TM-score=0.502 to 1xb2B SCOP code=a.5.2.2