Template-based Modeling Results for YFBM_ECOLI

Submitted Primary Sequence

>Length 167
MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG
CCEEEEEEECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG
41000000112231033014223320022122222223201011000000000012212331431100100003311332231000002331012002203302232024201231023130101102233212200210120022002002200532310001015
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG
1	MUSTER	1rylA	0.981	0.940	3.244	threading_1	--MIGYFAEIDSEKINQLLESMDN-----IHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
2	SPARKS	1ryla	0.981	0.940	3.763	threading_2	--MIGYFAEIDSEKINQLLESMDN-----IHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
3	PROSPECT2	1rylA	0.981	0.940	2.562	threading_3	M--IGYFAEIDSEKINQLLESMDN-----IHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
4	PPA-I	1rylA	0.981	0.940	5.479	threading_4	--MIGYFAEIDSEKINQLLESMDN-----IHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
5	HHPRED-l	1ryl_A	1.000	0.940	10.346	threading_5	--MIGYFAEIDSEKINQLLES-----MDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
6	HHPRED-g	1ryl_A	1.000	0.940	8.628	threading_6	--MIGYFAEIDSEKINQLLES-----MDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
7	SP3	1ryla	0.981	0.940	1.728	threading_7	--MIGYFAEIDSEKINQLLESMDN-----IHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
8	SAM-T99	1rylA	1.000	0.940	5.417	threading_8	--MIGYFAEIDSEKINQLLES-----MDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLED--DGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIV-
9	MUSTER	2vzaA1	0.102	0.880	0.630	threading_9	TTTLKNKYGINLNAFLEKCSHDTAKAMINLREESLPEY-FD-TAYLCHIHQQLFKNTFEWAGY--------LRHIPFTFADGTTAAMPEMKRTGWKNAFAIGDEIQEGLQRL-DQTLAEKNNLQGL-----TREEFNSEAIELFNSLNQLNGRTQR----LFFENLG
10	SPARKS	1lvk_2	0.127	0.946	0.639	threading_10	L-----LAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDGFSQEEQMS---IFKIILGNIKFEKGAGEGAVLKDKTALNAASTVF-GVNPSVLEKALMEPRILAGRLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCGVLDISG

Predicted Tertiary Structure


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TM-score=0.959 to 1rylA TM-score=0.988 to native SCOP code=d.276.1.1	TM-score=0.963 to 1rylA TM-score=0.992 to native SCOP code=d.276.1.1	TM-score=0.959 to 1rylA TM-score=0.988 to native SCOP code=d.276.1.1	TM-score=0.958 to 1rylA TM-score=0.987 to native SCOP code=d.276.1.1	TM-score=0.959 to 1rylA TM-score=0.988 to native SCOP code=d.276.1.1

Experimental Structure

Download 1rylA

SCOP code=d.276.1.1