Template-based Modeling Results for YFAQ_ECOLI

Submitted Primary Sequence

>Length 549
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCCHHEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEEEEECCCEEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
441220000000000110233210100022243210010123222322112321201001001000000011132223213042323310000211321221100031001101122030012000400332301100110230223220203100200220212330120002001232421101101000101001111333331221010000021010001012222100120021034103222312322001010012121330123322211320212131100011011010213010000124121100020212100010142214222230010000001000121023323112022111011014222221021012212200001100201012113121022201110232230120022002321013120221201202301110131022013303321223314110001012122223232410001001213110200110010002111212213002110321224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
1	SPARKS	1nrfa	0.142	0.399	1.116	threading_1	EDYSTFFD----------KFSASGGFVLFNSNRKKYTIYNRKESTSR--------FAPASTYKVFSALLALESGIITKNDSHTWDGTQYPYKEWN-QDQDLFSAMSSSTTWYFQKLDRQIGEDHLRHYLKSIHADYW------LDGSLQISPLEQVNILKKFDFKQSNIETVKDSIRLEESNGR------VLSGKTGT--SVINGELHAGWFIGYVETADNTFFFAQGEKRAAGSSAAEIALSILDKKGIYP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1w36D	0.105	0.831	1.463	threading_2	GDEHPAVTLAAALLSHDAGEGHVC--------------LPLSRLENNEASHPLLATCVS-----------------------------------EIGELQNWEECLLASQAVSRGDELCGDRLYLNRMWCNER--TVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAA------------------------------------AVALTRRISVISGGPGTGKTTTVAKLLAALIQMAD----GERCRIRLAAPTGKAAARLALRQLPLTDEQKKRIPEDASTLHRLLHAGNPLHLDVLVVPDHARVIFLGSVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRQPSRLPEHETTWAMTVHKSQGSEFDHAAL--ILPSQRTPVVTRELVYTAVTRARRRADERILSAAIAALFSS
3	HHPRED-l	1k38_A	0.137	0.372	1.416	threading_3	----------------------TLRSDWRKQAKGTIVVADEQADRAMLVPVRSKRYSPASTF-IPHTLFALDAGAVRDEIFRWDGVNRGF-AGH-NQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYST---GDYWIEGSLAISAQEQIAFLRKLPFRVEHQRLVKDLMIVEAGR------NWILRAKTGWE-------GRMGWWVGWVEWPTGSVFPNRMDDLAIVRAILRSIE-ALP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1b5qa	0.078	0.774	1.416	threading_4	PRMSGISAAKRLSE----AGITDLLILEATDHRMHKTNFAGINVLGANWVEGVNGGKMNPIWPIV------NSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKR--------------IELADSVEEMG---EKLSATLHASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKF-----DYEFAEPPRVTSLQNTVPLATFSDFGDDV--------YFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQ-----LNKVVREIKYSP-----------GGVTVKTEDNSVYSAD--------------YVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRG----------------YYGVWQEFEKQYPDAVTDEESRRIE--QQSDEQTKAEIM---------------------------------QVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAEHTS---EHYNGYVHGAYLIDSAEILIMC
5	HHPRED-g	1k38_A	0.130	0.393	1.680	threading_5	----------------------TLESDWRFQAKGTIVVADEQADRAMLVDPRKKRYSPASTF-IPHTLFALDAGAVRDEIFRWDGVNRG-FAGH-NQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYST---GDYWIEGSLAISAQEQIAFLRKLPFRVEHQRLVKDLMIVEAGR------NWILRAKTGWEG-------RMGWWVGWVEWPTGSVFF-------------------------------------------------------------------------------------------ALN-I------------DTPNRMDDLFKREAIVRAILRSIEALPP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PROSPECT2	2apgA	0.102	0.840	1.401	threading_6	NKPITAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDGIPEREWMPQVNGAFKAAIKFVNWRKSP----DPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACGALDGKLAPCLSDGTRQMSHAWHFDAHLVADFLKRW----------------------AVERGVNRVVVDVRLNNRGY------ISNLLTKEGADLFIDCSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPN-------DDARDGVEPYTSSIAMNSGWTWKIPMLGRFGS-----GYVFSSHF-------TSRDQATADFLKLWGLSDNQPLNQYFIYAALYQLVKHFPDTSF--------------DPRLSDAFNAEIVHMFDDCRDFVQAHYFTTSRDDTPF-WLANRHDLRLSDAIKEKVQRYKAGLPLTTTSFDDSTYYETFDYEFKNFWLNGNYYCIFAGLGMLPDRS----------LPLLQHRP-----ESIEKAEAMFASIRREAERLRTSLPT--NYDYLRSLR-----D
7	SPARKS	1xa1a	0.127	0.417	1.086	threading_7	-NYKKPLHYQILDKSKIFGSNSGSFVMY-SMKKDKYYIYNEKESRKR--------YSPNSTYKIYLAMFGLDRHIINDENSSWNHKHYPFDA--WNKEQDLNTAMQNSVNWYFERISDQIPKNYTATQLKQGNKNLGSYKSYWMEDSLKISNLEQVIVFKNMHFSKKAKNQLSSSLLIKKNEKY------ELYGKTGTGIVNGKYN--NGWFVGYVITNHDTHLSDGKPSGKNAELISEKILKEMGVLN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	PROSPECT2	1xpqA	0.103	0.829	1.381	threading_8	PAKKKIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDGRTRFVF----DDDNFIYIDEERGRV---------------DHDKELLLEIVDNEMSK----FAELEFHQHLGVSDCSFFQLVMKYRRQFLTNDQIRYLPQLCRY-----LELWHGLDWKLLSAKDTYFGHQ-------------GRNAFALNY-------DSVVQRIAQSFPQ-------NWLKL----SCEVKSITREPS----------KNVTVNCEDGTVYNAD--------------YVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLE----RTSVTCWSQPLFFVNLSKSTGVAS--FMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCVIDGMRPIENIANANKPVLRNIIVSNWTRDP-----YSRGAYSACFPVDMVVAMSNEHTIMDGAGCAYGAWEREATRISHH
9	HHPRED-l	2iwb_A	0.123	0.413	1.394	threading_9	------------DKYETNVSYKKLNAPYFKGFDGSFVLYNEEQAYSIYNEPESKRYSPNSTYKIYLALMAFDQNLLSLNEQQWDKHQY--PFKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNEISENYWNESSLKISAIEQVNLLKNMHFDNKAIEKVENSMTLKQKD------TYKYVGKTGTGIVNH--KEANGWFVGYVETKDNTYLKGEDNAN--GEKAQQISERILKEMELI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	HHPRED-g	3hbr_A	0.119	0.397	1.321	threading_10	------------------QENKSWNAHFTEHSQGVVVLWNEKQQGFTNNLKANQAFLPASTF-IPNSLIALDLGVVKDEFKWDGQTR-D-IATWN-RDHNLITAMKYSVVPVYQEFARQIGEARMSKMLHAFDDSFWLD------GGIRISATEQISFLRKLHVSERSQRIVKQAMLTE--AN----GDYIIRAKTGYS-TRI--EPKIGWWVGWVELDDNVWFF----------------------------------------------------------------AMNMDMPT---------------S-----------------------D---GLGLRQAITKEVLKQEKIIP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.611 to 1nrfA SCOP code=e.3.1.1	TM-score=0.441 to 2hyiI SCOP code=c.37.1.19	TM-score=0.600 to 1k38A SCOP code=e.3.1.1	TM-score=0.817 to 1b5qB SCOP code=c.3.1.2	TM-score=0.625 to 1k38A SCOP code=e.3.1.1