Template-based Modeling Results for YEJE_ECOLI

Submitted Primary Sequence

>Length 341
MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATNKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATNKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATNKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV
55420210121012024121000000000000000000200022211102020100000011112131101121302130220121134311000000200122121112210101112301000121001000000100100000000000000000000000000110101100110030010002000000000003220110000000000000000011101311111002003111111000001100010010000000010000000100011011112111010020011013112111100000000000000010002001211123434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATNKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV
1	SPARKS	3dhwa	0.156	0.545	1.730	threading_1	------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEITGL--IEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYIATVMNTVLVLLVILVYLIQFAGD------------
2	PROSPECT2	3a6pA1	0.106	0.968	1.370	threading_2	AMDQVNALLKFCEEFKEKCPICVPCGAIVRHFGLQILEHVVKFRKNSVMEL--------IANGTLNILEEEREWPQHWPDIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTTQNMERIFSFLLNTLQENVNKYQKAQANCRVGVAALNTLAGYIDCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTLRSSTQMTWGALFLRASMTNLVKMGFPSKTDSPSCDEDFNAFFNSSRAQQGEVMRLACRLTSFQMAGEWLKYQLS---TF
3	PPA-I	3dhwA	0.158	0.557	3.948	threading_3	------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGD------------
4	HHPRED-l	3tui_A	0.153	0.595	5.121	threading_4	-------------------------------------------------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR----
5	PROSPECT2	2bkuB2	0.105	0.783	1.359	threading_5	TDTVAETSASISTFVMDKTLEDAQSLQELQSNILTVLAAVIRKSPSSV---------------------------EPVADMLMGLFFR----------------------------------LLEKKDSAFIEDDVFYAISAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNPENGTLEALDYQIKVLEAVLDAYVGIVAGFPYVGTIFQFI-------------AQVAEDPQLYSEDATSRAAVGLIGDIAAMDWVIDYIKRTRSGQLFS
6	HHPRED-g	3tui_A	0.148	0.595	4.805	threading_6	-------------------------------------------------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENA-LLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGA------GGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR----
7	HHPRED-l	3rlf_F	0.127	0.944	4.430	threading_7	YAQGEYLSSGLYI--FANRKGMAGMGLFVLFPLVCTIAIAFTNYSSTNQWQAGKYNFGLYPAGGETKYLSDFKAQPEGRVITQRQALSPDGNSGTQPLTLDGDGTNYRNWGDEKLSPGYTVTTGWKNF-TRVFTDFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQGETMLIIVNTWLGYPYMMILCMGLLKAIP-DDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPGYTDLLVNYTYRIAFEGQDFGLAAAIATLIFLLVGALAI---------------
8	SP3	3dhwa	0.163	0.557	1.360	threading_8	------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTGQKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGD------------
9	SP3	2r6gf	0.167	0.947	1.287	threading_9	ITTL-ILSSAGLYIF-ANRKGMAGMGLFVLFPLVCTIAIAFTNERAQEVSWQGKTYFGLYPAYLSDAFGGETTAQPEGERVITRQALSDDGSGTQPLYTLDGDGTNTANWGDEKLSPGYTVTTGWKNF-TRVFTGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLYAVPSFISILIFKGLFNQSRTMLIIVNTWLGYPYMMILCMGLLKAI-PDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFFVLIQLDRLGTTTPAGYTDLVNYTYRIGGGGQDFGLAAAIATLIFLLVGALAIV--------------
10	HHPRED-g	3d31_C	0.123	0.666	3.743	threading_10	-------------------PLTVFLLVLFLFIFLTLSNMIFEQ------------------------I-----------------------------------------------------TEDFSGLVKAAGRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSALPGIVVAMLFVSMPYLANSAREG-FKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILA-YYPM---VGPTLIYDRFISYGL-SASRPIAVLLILVTLSIFLVIR------------

Predicted Tertiary Structure


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TM-score=0.712 to 1t5jA SCOP code=a.209.1.1	TM-score=0.685 to 3dhwA SCOP code=f.58.1.1	TM-score=0.584 to 1xm9A SCOP code=a.118.1.24	TM-score=0.735 to 3dhwA SCOP code=f.58.1.1	TM-score=0.696 to 3dhwA SCOP code=f.58.1.1