Template-based Modeling Results for YEJA_ECOLI

Submitted Primary Sequence

>Length 604
MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPIYSLGIDTWWYDVNKAAKLPSASKQGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPIYSLGIDTWWYDVNKAAKLPSASKQGE
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCEECCCCCCCCCHHCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPIYSLGIDTWWYDVNKAAKLPSASKQGE
2111001000000000021221331100001120301131310110112033102000001121321121114111000021001000212323312110000210201422210001003303022122010300100021012321221210231210201141102020232123001000101000231133332232122211110001011022211000110421112313133131301101010011230002003212010112110310113221331332200212232311210100000033321213200100100000310020012212220202132121103212220111112213430123112321322223232212310210140034011223232101132121010100121221220020012003502020102101012002113222110000002111111110010000311321210110303100100220130322332012002001200122000000000020000011313112220211000100001231112122125434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPIYSLGIDTWWYDVNKAAKLPSASKQGE
1	MUSTER	3i5oA	0.186	0.874	2.784	threading_1	------------------------------------------------SLPREDTVYIGGWGPATTWNLYAPQSTWG-TDQFMYLPAFQYDLGRD-AWIPVIAERYEFVDDK-TLRIYIRPEARWSDGVPITADDFVYALELTKELGIGPGGGWDTIEYVKAVDTKVVEFKAKEENLNYFQFLSYAQPMPKHVYERKDWINDKPEEQVVSGPYKLYYYDPN-IVVYQRVDDWWGKDIF---GLPRPKYLAHVIYKDNPSASLAFERGDIDWNGLFIPSVWELW-EKKGLPVGTWYKKE-PYFIPDGVGFVYVNNTKPGLSDPAVRKAIAYAIPYNEMLKKAYFGYGSQAHPSMVID--------------LFEPYKQYIDYELAKKTF----GTEDGRIPFDLDMANKILDEAGYKKGPDGVRVGPDGTKYTISVPYGWTDWMMMCEMIAKNLRSIGIDVKTEFPDFSVWADRMTKGTFDLIISWSPSFDHPFNIYRFVLDKRLSKPAGDWERYDNDEVVELLDKAV-STLDPEVRKQAYFRIQQIIYRDMPSIPAFYTAHWYEYSTKYWNWPSEDNPAWFRPSPWHADAWPTLFIISKKSDPQ
2	SPARKS	1ztya	0.184	0.826	5.005	threading_2	----------------------------------------------------RSELTIVPDFMVRNFNPYLATNLRTT-TDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVWKDKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANL------EVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPD------IDRTYAAAN--PNHHYWYPAAGTQAFMVNFKNPALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASG------------------------LGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGVETPSGKSFELLIQSPNGWFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGRFAMHYFTDKKLDGLLDSFYKT-ADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNTTRFTNPKGRPSVWAGIPELDLKPV-------------
3	PROSPECT2	2o7iA	0.172	0.876	5.051	threading_3	------------------------------------------------SLPREDTVYIGGALWGPATTWNYAPQSTWGTDQFMYLPAFQYDLGRD-AWIPVIAERYEFVDDK-TLRIYIRPEARWSDGVPITADDFVYALELTKELGIGPGGGWDTIEYVKAVDTKVVEFKAKEENLNYFQFLLGAQPMPKHVYERKDWINDKPEEQVVSGPYKLYYYDPN-IVVYQRVDDWWGKDIF---GLPRPKYLAHVIYKDNPSASLAFERGDIDWNGLFIPSVWELWEKKGL--PVGTWYKKEPYFIPDGVGFVYVNNTKPGLSDPAVRKAIAYAIPYNEMLKKAYFGYGSQAHPSMVID--------------LFEPYKQYIDYELAKKTF----GTEDGRIPFDLDMANKILDEAGYKKGPDGVRVGPDGTKYTISVPYGWTDWMMMCEMIAKNLRSIGIDVKTEFPDFSVWADRMTKGTFDLIISWSPSFDHPFNIYRFVLDKRLSKPAGDWERYDNDEVVELLDKAV-STLDPEVRKQAYFRIQQIIYRDMPSIPAFYTAHWYEYSTKYWNWPSEDNPAWFRPSPWHADAWPTAKIFEDLQKAT
4	PPA-I	3i5oA	0.184	0.874	4.159	threading_4	------------------------------------------------SLPREDTVYIGGWGPATTWNLYAPQSTWG-TDQFMYLPAFQYDLGR-DAWIPVIAERYEFVDDK-TLRIYIRPEARWSDGVPITADDFVYALELTKELGIGPGGGWDTIEYVKAVDTKVVEFKAKEENLNYFQFLSYAQPMPKHVYEIKDWINDKPEEQVVSGPYKLYYYDPN-IVVYQRVDDWWGKDI---FGLPRPKYLAHVIYKDNPSASLAFERGDIDWNGLFIPSVWELWE-KKGLPVGTWYK-KEPYFIPDGVGFVYVNNTKPGLSDPAVRKAIAYAIPYNEMLKKAYFGYGSQAHPSMVI--------------DLFEPYKQYIDYELAKKTF----GTEDGRIPFDLDMANKILDEAGYKKGPDGVRVGPDGTKYTISVPYGWTDWMMMCEMIAKNLRSIGIDVKTEFPDFSVWADRMTKGTFDLIISWSVGPSHPFNIYRFVLDKRLSKPAGDWERYDNDEVVELLDKAV-STLDPEVRKQAYFRIQQIIYRDMPSIPAFYTAHWYEYSTKYWNWPSEDNPAWFRPSPWHADAWPTLFIISKKSDPQ
5	HHPRED-l	2o7i_A	0.185	0.861	3.602	threading_5	------------------------------------------------SLPREDTVYIGGAGPATTWNLYAPQSTW-GTDQFMYLPAFQYDL-GRDAWIPVIAERYEFVDDK-TLRIYIRPEARWSDGVPITADDFVYALELTKELGIGPGGGWDYIEYVKAVDTKVVEFKAKEENFQFLSYSLGAQPMPKHVYERIRAKDWINDKPVVSGPYKLYYY-DPNIVVYQRVDDWWGKDI---FGLPRPKYLAHVIYKDNPSASLAFERGDIDWNGLFIP-SVWELWEKKGLP---VGTWEPYFI-PDGVGFVYVNNTKPGLSDPAVRKAIAYAIPYNEMLKKAYFGYGSQAHMVIDLFEPY-K------------QY---IDYELAK-KT---FGTEDGRIPFDLDMANKILDEAGYKKG-PDGVRVPDGTKLGYTISVPYGDWMMMCEMIAKNLRSIGIDVKTEFPDFSVWADRMTKGTFDLIISWSVGPDHPFNIYRFVLDKRLSGWAGDWERYDNDEVVELLDKAV-STLDPEVRKQAYFRIQQIIYRDMPSIPAFYTAHWYEYSTKYINWPSEDNPAWFRPSPWH-ADATLFIISKKSDPQ-
6	HHPRED-g	1zu0_A	0.192	0.836	3.080	threading_6	----------------------------------------------------RSELTIVPPTMVRNFNPYLATNL-RTTTDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVWKDVKDTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAAN------LEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDR-TYAA---ANPNHH-YW---YPAAGTQAFMVNFKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGY-AFEAWSDEATHK---KYK--------------------GFNTYDVEGSKKLLAKAGFKDVNGGFVETPSGKSFELLIQSPNGWFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSPRFAMHYFTDKKLDGLLDSFYKT-ADKNEQLAIAHGIQKIIAENQVTIPVMSGAWTRFTGWWSEENPKGRPSVWAGIPERLLHVLDLKPVK-------
7	SP3	3i5oa	0.184	0.874	5.004	threading_7	------------------------------------------------SLPREDTVYIGGWGPATTWNLYAPQSTWG-TDQFMYLPAFQYDLGR-DAWIPVIAERYEFVDDK-TLRIYIRPEARWSDGVPITADDFVYALELTKELGIGPGGGWDTIEYVKAVDTKVVEFKAKEENLNYFQFLSYAQPMPKHVYERKDWINDKPEEQVVSGPYKLYYYDPN-IVVYQRVDDWWGKDI---FGLPRPKYLAHVIYKDNPSASLAFERGDIDWNGLFIPSVWEL-WEKKGLPVGTWYKKE-PYFIPDGVGFVYVNNTKPGLSDPAVRKAIAYAIPYNEMLKKAYFGYGSQAHPSMVID--------------LFEPYKQYIDYELAKKTFGTED----GRIPFDLDMANKILDEAGYKKGPDGVRVGPDGTKYTISVPYGWTDWMMMCEMIAKNLRSIGIDVKTEFPDFSVWADRMTKGTFDLIISWSVGPSHPFNIYRFVLDKRLSKWAGDWERYDNDEVVELLDKAVST-LDPEVRKQAYFRIQQIIYRDMPSIPAFYTAHWYEYSTKYWIWPSEDNPAWFRPSPWHADAWPTLFIISKKSDPQ
8	SAM-T99	1xocA	0.213	0.808	3.810	threading_8	------------------------------------------------KPQQGGDLVVGSIGEPTLFNSLYSTDDSTDIENMLYSFLTKTDEK--LNVKLSLAESIKELDGGLAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDYKGERGTYEMLKVEKKGDYEVLFKLKYKDGNFYNNADSTAILPKHILGNADLNEFNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFE-------GRPYLDTVTYKVIPDANAAEAQLQAGDINFFNVPATDY-KTAEKFNNLK--------IVTDLALSYVYIGWNEKNELFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIP--------------------------------ESPLSWNYPKDIDVFEYNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTNQGNREDIAVVVQEQLKKIGIEVKTQIVEWSALVEQMNNWDFDAMVMGWSLSTFPD--QYDIFHSSQIKKGLNYVWYKNAEADKLMKDAKSIS-DRKQYSKEYEQIYQKIAEDQPYTFLYY-PNNHMAMPENLEGYKYHPKRDLYIEKWWLAK--------------
9	MUSTER	1xocA	0.214	0.811	2.559	threading_9	------------------------------------------------KPQQGGDLVVGSIGEPTLFNSLYSTDASTDIENMLYSFLTKT--DEKLNVKLSLAESIKELDGGLAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDYERGSTYEMLKSVEKKGDYEVLFKLKYKDGNFYNNALDTAILPKHILGNVPIADLNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFE-------GRPYLDTVTYKVIPDANAAEAQLQAGDINFF-NVPATDYKTAEKFNNLK---IVTDL-----ALSYVYIGWNEKNELFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIPESPLSWNYPKDID------VPKFE------------------------YNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTGNKVREDIAVVVQEQLKKIGIEVKTQIVEWSALVEQMNNWDFDAMVMGWSLSTFPD--QYDIFHSSQIKKGLNYVWYKNAEADKLMKDAKSI-SDRKQYSKEYEQIYQKIAEDQPYTFLYYPN-NHMAMPENLEGYKYHPKDLYNIEKWWLAK--------------
10	SPARKS	3i5oa	0.186	0.874	4.967	threading_10	------------------------------------------------SLPREDTVYIGLWGPATTWNLYAPQSTWG-TDQFMYLPAFQYDLG-RDAWIPVIAERYEFVDDK-TLRIYIRPEARWSDGVPITADDFVYALELTKELGIGPGGGWDTIEYVKAVDTKVVEFKAKEENLNYFQFLSYAQPMPKHVYERKDWINDKPEEQVVSGPYKLYYYDPN-IVVYQRVDDWWGKDIF---GLPRPKYLAHVIYKDNPSASLAFERGDIDWNGLFIPSVWE-LWEKKGLPVGTWYKKE-PYFIPDGVGFVYVNNTKPGLSDPAVRKAIAYAIPYNEMLKKAYFGYGSQAHPSMVID--------------LFEPYKQYIDYELAKKTFGTE----DGRIPFDLDMANKILDEAGYKKGPDGVRVGPDGTKYTISVPYGWTDWMMMCEMIAKNLRSIGIDVKTEFPDFSVWADRMTKGTFDLIISWSVGPSHPFNIYRFVLDKRLSKPAGDWERYDNDEVVELLDKAVST-LDPEVRKQAYFRIQQIIYRDMPSIPAFYTAHWYEYSTKYWINPSEDNPAWFRPSPWHADAWPTLFIISKKSDPQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.806 to 1xocA SCOP code=c.94.1.1	TM-score=0.808 to 1xocA SCOP code=c.94.1.1	TM-score=0.762 to 1uqwA SCOP code=c.94.1.1	TM-score=0.792 to 1xocA SCOP code=c.94.1.1	TM-score=0.806 to 1xocA SCOP code=c.94.1.1