Template-based Modeling Results for YEIU_ECOLI

Submitted Primary Sequence

>Length 237
MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK
553212100000000000000000111100000000000000123003030000000001121010000000000000010233221111000000000000000110022012132111100023001002002021331133112111000000000000110121000000000000000100100100110000000000000010000100120010014102233442445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK
1	MUSTER	2akcB	0.112	0.907	1.457	threading_1	MQPFHSPEESVNSQFYL-------PGNDDPAFRYDKEAYFKGYA-IKGSPRWKQAAEDADIS--VENIARIFSPVVGAKISPKDTPETW--NMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTC-----RPEDENTLRKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQ--IPAFQKSLAKVREELNDKNNLLS--
2	SPARKS	1d2ta	0.111	0.916	1.430	threading_2	TKPDLYYLKNSEAINSLALLP-PPPAVGSIAFLNDQAMYEQG-RLLRNTERGKLAAEDANLSSGGVANAF--SGAFGSPITEKDAPALHKLLTNMIEDA-GDLATRSAKDH---YMRIRPFAFYGVS-----TCNTQDKLSKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLH-TNPAFQQQLQKAKAEFAQHQK-----
3	PROSPECT2	1d2ta	0.114	0.890	1.621	threading_3	GNDTLKNSEAINSLA-------LLPPPPAVAFLNDQAMYEQGRL-LRNTERGKLAAEDANLS---SGGVANAFSGAFGSPITEKDAPALHKLLTNMIEDAGDLATRSAKDH---YMRIRPFAFYGV-----STCNTQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQNEI-LKRGYELGQSRVICGYHWQSD-VDAARVVGSAVVATLHTNPAFQQQLQKAKAEF-----AQHQK
4	PPA-I	2akcB	0.114	0.886	1.991	threading_4	ESVNSQFYLP-------------PPPGNDDPFRYDKEAYFKG-YAIKGSPRWKQAAEDADISVENIARIFSPVVGAK---ISPKDTPETWNMLQNLLKVGGYYATASAKKY---YMRTRPFVLFNHSTC---RPEDENTLRKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT-IPAFQKSLAKVREELNDKNNLLS--
5	HHPRED-l	1d2t_A	0.109	0.890	4.803	threading_5	TKPDLY---Y--LKNSEAISLALLPAVGSIAFLNDQAMYEQG-RLLRNTERGKLAAEDANLSSGGVANAF--SGAFGSPITEKD---APALHKLLTNMIEDALATRSAKD---HYMRIRPFAFYGVST---CNT--QDKLSKNGSYPSGHTSIGWATALVLAEINPQRQN-EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVA-TLHTNPAFQQQLQKAKAEFAQHQK-----
6	HHPRED-g	1d2t_A	0.114	0.852	2.289	threading_6	--------------GNDTTTLYYLKNSGSIAFLNDQAMYEQG-RLLRNTERGKLAAEDANLSSGGVANAFS-GAF--G--SPITEKDAPALHKLLTNMIEDAGLATRSAK--DHYMRIRPFAFYGVS----TCNT--DKLSKNGSYPSGHTSIGWATALVLAEINPQRQNE-ILKRGYELGQSRVICGYHWQSDVDAARVVGSAV-VATLHTNPAFQQQLQKAKAEFAQHQK-----
7	SP3	1d2ta	0.120	0.916	1.411	threading_7	TKPDLYYLKNSEAINSLALLP-PPPAVGSIAFLNDQAMYEQG-RLLRNTERGKLAAEDANL-SSGG-VANAFSGAFGSPITEKDAPALHKLLTNMIEDAGDLAT--RSAKDHY--MRIRPFAFYGVS-----TCNTQDKLSKNGSYPSGHTSIGWATALVLAEIN-PQRQNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLH-TNPAFQQQLQKAKAEFAQHQK-----
8	SAM-T99	1eoiA	0.125	0.608	1.585	threading_8	----------------------------------------------------------------SGGVANAFSGAFGSPITEKD----APALHKLLTNMIEDDLATRSAKDH--YMRIRPFAFYGVST---CNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQKRGY--------LGQSRVICGYHWQSDVDAARVVGSAVVATLHTNPAFQQQLQKAKAE------------
9	MUSTER	1eoiA	0.120	0.882	1.310	threading_9	TKPDLYYL-AINSLALLP-----PPAVGSIAFLNDQAMYEQG-RLLRNTERGKLAAEDANLSS--GGVANAFSGAFGSPITEKDA---ALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCN-----TTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLH--NPAFQQQLQKAKAEF--QH------
10	SPARKS	2a96a	0.140	0.903	1.316	threading_10	-QPFHSPEESVNSQFY-------LPPNDDPAFRYDKEAYFKG-YAIKGSPRWKQAAEDADI-SVENIARIFSPVVGAKI-SPKDTPETWNMLQNLLKVGGYYAT----ASAKKYYMRTRPFVLFNHSTCRPEDENTLRKDG---SYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARL-QTIPAFQKSLAKVREELNDKNNLL---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.876 to 1eoiA SCOP code=a.111.1.1	TM-score=0.873 to 1eoiA SCOP code=a.111.1.1	TM-score=0.903 to 1eoiA SCOP code=a.111.1.1	TM-score=0.882 to 1eoiA SCOP code=a.111.1.1	TM-score=0.841 to 1eoiA SCOP code=a.111.1.1