Template-based Modeling Results for YEII_ECOLI

Submitted Primary Sequence

>Length 362
MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCHHHCCCCHHHHHCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV
44331330120034122031320032041122200000110142021313011123331000000000000000313333222211101001101000000000202210000000021210210021034120302000102332100000001533100000010202320133002002320330100001020123002100210341300000003231231330022010000102101201222222321122003102421020000011320000013312200020121211000000000000000001222203100200000000021212221121211101111223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV
1	MUSTER	1rk2B	0.227	0.840	2.480	threading_1	------------------------------------------------------QNAGSLVVLGSINADHILNLSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH-AGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVN-GEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTGAQPSVPWREEIDAFLDRQ--
2	SPARKS	3go6a	0.195	0.765	3.586	threading_2	--------------------------------------------------------APRVCVVGSVNMDLTFVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG-PSGTAIIVVDASAENTVLVA-PGANAHLTPV-----PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQSLQDLAAIADVVIANEHEANDWPS-------------------PPTHFVITLGVRGARYVGADG-VFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGRLRALRRACAAGALLVSGVGDCAPAAAAIDAALRAN--
3	PROSPECT2	1rkd_	0.234	0.837	3.768	threading_3	--------------------------------------------------------AGSLVVLGSINADHILNLSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH-AGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASV-NGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIARKGAQPSVPWREEIDAF-LDRQR
4	PPA-I	1rk2B	0.227	0.840	3.322	threading_4	------------------------------------------------------QNAGSLVVLGSINADHILNQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH-AGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASV-NGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTGAQPSVPWREEIDAFLDRQ--
5	HHPRED-l	3kzh_A	0.285	0.804	2.436	threading_5	------------------------------------------------------RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAEN-ARVGVNTNF-SILGNDEHGKSIVEHSKKIGYH-DDS-VIEGGSTPTYLAILDENGE-VSAIAD-KSIGA-NTDFIDSKREIFENAEYTVLDSDNP-EI-EYLLKNFKKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVS-CGKIKATEVDVKNVTGAGDSFVAGLGYGY-NK-PIEDIVKFA---SNITISHEETIHPD-ALDTVLAKLEK-
6	HHPRED-g	2fv7_A	0.193	0.831	2.157	threading_6	--------------------------------------------------------VAAVVVVGSCMTDLVSLSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV-AGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAPAIDLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLYPNLSLEDMLNRSNFIASVQAAGTQSSYPYKKDLPLTLF----
7	SP3	3go6a	0.195	0.765	3.860	threading_7	--------------------------------------------------------APRVCVVGSVNMDLTFVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG-PSGTAIIVVDASAENTVLVA-PGANAHLTPV-----PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQSLQDLAAIADVVIANEHEANDWPS-------------------PPTHFVITLGVRGARYVGADG-VFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGRLRALRRACAAGALLVSGVGDCAPAAAAIDAALRAN--
8	SAM-T99	1rk2B	0.217	0.840	3.555	threading_8	------------------------------------------------------QNAGSLVVLGSINADHILNLQSFPTPGETVTGNYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH-AGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQTIVALNPAPAREL--PDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNG-EGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQ
9	MUSTER	2fv7A	0.199	0.831	2.385	threading_9	--------------------------------------------------------VAAVVVVGSCMTDLVSLTRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV-AGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAPAIALDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYNLSLEDMLNRSNFIAAVSVAGTQSSYPYKKDLPLTLF----
10	SPARKS	2fv7a	0.203	0.831	3.436	threading_10	--------------------------------------------------------VAAVVVVGSCMTDLVSLTRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV-AGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAPAADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAPNLSLEDMLNRSNFIAAVSAAGTQSSYPYKKDLPLTLF----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.912 to 1rk2B SCOP code=c.72.1.1	TM-score=0.911 to 1rk2B SCOP code=c.72.1.1	TM-score=0.805 to 1rk2B SCOP code=c.72.1.1	TM-score=0.902 to 1rk2B SCOP code=c.72.1.1	TM-score=0.911 to 1rk2B SCOP code=c.72.1.1