Template-based Modeling Results for YEIH_ECOLI

Submitted Primary Sequence

>Length 349
MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA
5532213312310120000000000000001000101202111010000000000000100123123202200110110001000000003010220030012000000000000000000001201213320010000000000000010022104132221110000000000000000000020102211120000000000110010000031012101100100100000000000000001022222232233242200100000000000110121132002001100100000000001020202102411020000000000000000000010012115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA
1	MUSTER	3zuxA	0.122	0.848	1.001	threading_1	-----------------------NILSKISSFIGKTFSL------WAALFAAAAFFA--------PDTFKWAGPY-IPWLLGIIMFGMGLTLKFDILFK--PKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCGGTASNVMT--LARGN---VALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWGLPYDAQKALTIEVGMQNSGLAAALA-----AAHFAAAPV--AVPGALFSVWHNISGSLLATYWAAKA-
2	SPARKS	3guua	0.125	0.828	1.053	threading_2	WIPAKPASPPK---------IFSYQVYEDATALDCAPSYSYLTGL----------------DQPNKVTAVLDTPIIIGWALQ-----QGYYVVSSDHE--GFKAAFIAGYEEGMAILDGIRALKNYQNLPSDSKVAL-EGYS-GGAHATVWATPELNVSAKDTFTFLAGFALAGVSGLSLHPDMESFIEARLNAKGQRTLKQIR-GRGFCLPQVVLTYPF--LNVFSLVNDTNLLNEAPIASILKQ-ETVVQAEASYTVSVPKFPRFIWH-----AIPDEIVPYQPAATYVKEQCAK---------GANINFSPYPIAE--------HLTAEIFGLVPSLWFIKQAFDG
3	PROSPECT2	1jdha	0.088	0.977	1.713	threading_3	SKKEASRHAIMRSPQMVSAIVTAGTLHNLSHHREGLLAIFKSGGIPALVKMAITTLHNLLLHQEGAKMAKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTEKLLWTTSRVLKVLSVCSSNKPAIVEAGLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLAEMAQNAVRLHYGLPVVVKLLHPPSH--------WPLIKATVGLIRNLALCPANHAPLMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYENIQRVAAGVLCELAQDKMS
4	PPA-I	3zuxA	0.136	0.845	1.438	threading_4	-----------------------NILSKISSFIGKTFSL------WAALFAAAAFFAPDTFKWAGP---------YIPWLLGIIMFGMGLTLKFDILFKH-PKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGN---VALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIME-----------SGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-
5	HHPRED-l	3zux_A	0.172	0.782	1.073	threading_5	----------NI-------------LSKISSFIGK----------TFSLWAALFAAAAFFAP-DTFKWAGPYI----PWLLGIIMFGMGLTLKPSDFDILFKHVIIGVIAQFAIMPATAWCLS-KLLNLPAEIAVGILVGCCPGGTASNV-MTYLA---RGNVALSVAVTSVSTLTSPLLTPAIFLMLA-G-----------EML----------------EIQAGMLMSIVK-MVLLPIVLGLIV--HKVLGS-KTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIVVVLHNGIGYLLGFGLPYDAQKEVGMQNSGLAAAFSVWHNISGSLLATYWAAKA-
6	HHPRED-g	3zux_A	0.175	0.771	1.367	threading_6	----------NILSKI-------------SSFIGKT------FSLWAALFAAAAFFAPDTF-----KWAGPYI----PWLLGIIMFGMGLTLKPSDFDILFKHPKVGVIAQFAIMPATAWCLS-KLLNLPAEIA----------VGVILVGCCPGTYLARGNVALSVAVTSVSTLTSPLLTPAIFLML------------AGEM----------------LEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGS---KTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLGIGYLLGFFAAWTGLPAQKALTIEVGMQNSGLAAALAAAHGALFSVWHNISGSLLA
7	SP3	2jfka	0.147	0.934	0.736	threading_7	RTPEAVQKLLEQGLRHSQDLAFLSMLNDIAAVPRGGPEVQQVPAGERPLWFICG-----TQWRGMGLSLMR-LDRFRDSILRSDEAVKPFGLKVSQLLLSTESTFDDIVHSFVSLTAIQIGLIDLLSCMGLRPDGIV--GHSLGEVACGYA-DGCLS-----QEEAVLAAYWRGQCIKEAHLPPGAMAAVGLSWEECKQRCPPAHNSKDTVTISGPQ--APVFEFVEQLREVRTYFMEAIAPPLLQELKKV--IREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNNLV--SPVLFQEALWHV-PEHAV--VLEIAPHALLQAVLKRGLCTIIPLMNLEFFLAGIG
8	SAM-T99	1m54A2	0.153	0.393	0.712	threading_8	GTGGTITGIARKLKEKCPGCRIIGVDPEGSILAE-------------------------------PEELNQ--------------------------TEQTTYEVEGIGYDFIPTVLDRTVVD-KWFKSNDEARMLIAQEGLLCGGSAGSTVAVAVKAAQELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFL----------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	3hfwA	0.091	0.908	0.809	threading_9	------------MEKYVAAMVLSAAGDALGYYNGKWEFLQ----DGEKIHRQLAQL---GLDALDVGRWRVSDDTVMHLATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDM-RAPGGASVHNAMQLKPGKPNGWRIPFNEGGCGAAMCIGLRFPHHSQLIQVSIESGRMTPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILVKERDQFYTSLSYSGWGGSSG-HDAPMIAYDAVLAAGDSWKELAHRAFFSDSTAAIAGCWWGVMYGFK-PSNYEK-YRNRLEETARALYSLGSVISL---------
10	SPARKS	2veoa	0.135	0.808	1.029	threading_10	VWIPAKPASPPKI--------FSYQVYEDATALDCAPSYSYLTGL----------------DQPNKVTAVLDTPIIIGWALQ-----QGYYVVSSDHE--GFKAAFIAGYEEGMAILDGIRALKNYQNLPSDSKVAL-EGYSGGAHATVWATSPELNVSAKDTFTFLAGFALAGVSGLSLHPDMESFIEARLNAKGQQTLKQICLPQVVLTYVFSLVNDTNLLNEAPIAGILKQETVV-------------QAEASYTVSVPKFPRFIWH-----AIPDEIVPYQPAATYVKEQCAK---------GANINFSPYPIAE--------HLTAEIFGLVPSLWFIKQAFDG

Predicted Tertiary Structure


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TM-score=0.403 to 1wu3I SCOP code=a.26.1.3	TM-score=0.421 to 2r2vA SCOP code=h.1.3.1	TM-score=0.550 to 2i3dB SCOP code=c.69.1.36	TM-score=0.675 to 1wa5B SCOP code=a.118.1.1	TM-score=0.428 to 2r2vA SCOP code=h.1.3.1