Template-based Modeling Results for YEHP_ECOLI

Submitted Primary Sequence

>Length 378
MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHEEEEEEECCEEEECHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS
554243222231021001001321322112023101100200120122323423213221121212010120021014002330022011100331103200112300331212120021002025212330120023001200320032003202301212223343222321330102000110032123331311111011122234423321000001321111200000000000023012020100001010000122012112101302121002010002002311422220000000112212212100210230141201000000022312211133002001302010000002100200221144
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS
1	SPARKS	2nvoa	0.130	0.915	1.557	threading_1	VANVYETADVDKLALWAVKYKARDGWSQAHPKTDDAARNAVLKFMVDGVLPKVD---------SPALRVIEGHLKATEAQTAAAAALMQEYRLPLEAVPTHVRGAEVYRAAMQTTWLLRNLGNLGGVLTPNDSATVQAVIERLTPAALKRGRIHPLDALKARLVYAQGQGVRGKGTWLPVPRVVDALE------------EAFTLAFGNVQPANTRHLLALDVSGSMTPNMAAAAMSLIALRTEP--DALTMGFAEQFRPLGITPRDTLESAMQSVSFGGTDCAQPILWAAQ--ERLDVDTFVVYTDNEGQVHPTVALDQYAQKMGRAPKLIVVG-LTATEFSIADPQRRDMLDVVGFD------AAAPNVMTAFARG
2	PROSPECT2	2nvoA	0.119	0.934	1.863	threading_2	SAQKHTVQATDFVREIAKTAPNAADDALGGWGRLTRRQADALRKAHPKTDDAARDGVLPKVDSPALRVIEGHLKATEAQTDAAAAALMQEYRLPLEAVPTHVRGAEVYRAAMQTNGLTWLLLGRVGVLTPNDSATVQAVIERLTDPAALKPLDALKARLVYAQGQGVRGKGTWLPVPRVVDALEEAFTL----------------AFGNVQPANTRHLLALDVSGSMTCGPNMAAAAMSLIALRTEPDALTMGFAEQFRPLGITPRDTLESAMQSVSFGGTDCAQPILWAAQ--ERLDVDTFVVYTDNETWAHPTVALDQYAQKMGRAPKLIVVG-LTATEFSIADPQ------RRDMLDVVGFDAAAPNVMTAFARG
3	PPA-I	1shuX	0.172	0.431	1.243	threading_3	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERPEMRLSFIVFSSQATIIRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIGLKTSSIIIALTDGKDGLVPSYAEKEAKISRSLGASVYCV------GVLDFEQAQLERIADSQVFPVKGGFQALKGIINSILAQ
4	SP3	2nvoa	0.119	0.934	1.235	threading_4	AKTAPNAADRKAAWDLPEVARTGTMAFADALGGWGRLTRRGVANVYETADVDKVKYKARDGDGVLPKVDSPALRVIEGHLDAAAAALMQEYRLPLEAVPTHVRGAEVYRAAMQTTWLLRNLGNLGGVLTPNDSATVQAVIERLTPAALKRHPLDALKARLVAQGQGVRGKGTWLPVPRVVDALEEAFTLAFGNVQPA----------------NTRHLLALDVSGSMGLTPNMAAAAMSLIALRTEPDALTMGFAEQFRPLGITPRDTLESAMQSVSFGGTDCAQPILWAAQ--ERLDVDTFVVYTDNAGQVHPTVALDQYAQKMGRAPKLIVVG-LTATEFSIADPQRRDMLD-----VVGFD-AAAPNVMTAFARG
5	HHPRED-l	3ibs_A	0.139	0.418	2.677	threading_5	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGVEVIIALDISNS-LAQRLAKRLISRLVDELDNDKVG-IVFAGDALPITSDYISAK-FLESISPKQGTAIGEAINLATRSFTPGVGRAIIVITDGENHEGG--AVEAAKAAAEKGIQVSVLGVG-PEGAPILNEG-CQEIAKGKGIYVVDNSNSAQKAISQEIS-
6	HHPRED-g	3ibs_A	0.146	0.418	1.959	threading_6	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGVEVIIALDISNS-LAQEKAKRLISRLVDELDNDKVG-IVFAGDAFTQLPITSDYK-FLESISPKQGTAIGEAINLATRSFTPGVGRAIIVITDGENHEGG--AVEAAKAAAEKGIQVSVLGVG-PEGIPVLNEG-CQEIAKDGIYVRVDNSNSASQEISK-AKS
7	PROSPECT2	1yvpA	0.133	0.976	1.521	threading_7	MDQTQPLVSDMNRLRRFLCFGSEGGTYYIEEKKLGQENAEALLRLIEDGKGQEGRAAKQCSDIKTKQAAFRAVPEVKDLWGRALRKAVS-DWYNTKDALNLAMAKEVQEAYKEKLKYLEATERVKRTKDELEIIHLIDEYKEIWKSLLQALLRNLGKMTADSVLAPASSEVSKKARIHPFHILVALETYKKGHGLRWIPDTAFYKSFKLVEPTGKRFLLAIDVSASMNQRASVVAAAMCMLVARTEKDSHMVAFSDEMLPCPITVNMLLHEVVEDITMGSTDCALPMLWAQK--TNTAADIFIVFTDCEEDVHPATALKQYREKMGIPAKLIVCAMTSNGFSIADPDD------RGMLDICGFDSGALDVIRNFTLDL
8	SAM-T99	1shuX	0.248	0.341	2.114	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRAF---DLYFVLDKSGSVANNWIEIYQQLAERFVSPEMRLSFIVFSSQILPLTGDRGKGLEDLKRVSPVGETYIHEGLKLANEQIQKATSSIIIALTDGLDGLVPSYAEKEAKISRSLGASVYCVGVLDFE--------------------------------------
9	HHPRED-l	3hrz_D	0.152	0.799	2.442	threading_9	GFYPVQTRTCRSTGSWSTLKRKAERAHCPRPDFENGEYWPSPYYNVSDGYTVNGRWSGQTAGYCSNPGIPI--GTRGQYRLEDSVTYHCS---RGLTGSQRRTCQESWSGTEPSCQ-----DSFMYDTPQEVAEA-----------FLSSLTET---------------------------------------KRKI----------VLDPSGSMNIYLVLDGSGSIGASDFTGAKLVNLIEKGVKPRYGLVTYATYPVKVSSNADWVTKQLNEINLKSGTNTKKALQAVYSMMSWRTRHVIILMTDGLHNMDPITVIDEIRDLREDYLDVYVFGVGP-----LVNQVNINALASKEQHVFVKDMENLEDVFYQMID-
10	SPARKS	1shtx	0.169	0.423	1.289	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAFDLYFVLDKSGSVANWIEIYNFVQQLAERFPEMRLSFIVFSSQATIIRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGSSIIIALTDGKDGLVPSYAEKEAKISRSLGASVYCV------GVLDFEQAQLERIADSKEQVFPVGFQALKGIINSILAQ

Predicted Tertiary Structure


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TM-score=0.526 to 1yvpB SCOP code=a.118.25.1	TM-score=0.568 to 1yvpB SCOP code=a.118.25.1	TM-score=0.656 to 1shuX SCOP code=c.62.1.1	TM-score=0.611 to 1yvpB SCOP code=a.118.25.1	TM-score=0.593 to 1shuX SCOP code=c.62.1.1