Template-based Modeling Results for YEGS_ECOLI

Submitted Primary Sequence

>Length 299
MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEECEEEEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR
55422100000004123321022002103432120201002341201200220352101000000010000200100131323320100000000010001101123103200210121210000001011100000000000002001201320331101000001000101212112020203111010100000001021111023001202132000000002222001000100323332320110101202020233010001232122220202002200201013313239
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR
1	MUSTER	2p1rA	0.820	0.946	2.780	threading_1	-ANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVETVIAGGGDGTINEVSTALIQIRDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGN---AEIDAVNDKTCFIN-ATGGFGTRI---------TTLGGVSYLIHGLRDT--LTPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLTQSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLLR
2	SPARKS	3t5pa	0.258	0.933	5.591	threading_2	KTKFEKVLLIVNPKAGQGTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFA-SKVDLIIVFGGDGTVFECTNGLA--PLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANG-QHFLNFWGIGLV-----------KAKLGKIGYYLSTIRTVKNAETFPVKITYDGQVYEDEAVLVVG-NGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGFKDYIGKKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCQIELLQGHFTIYNPAVV----
3	PROSPECT2	2bonA	0.986	0.953	4.712	threading_3	----PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRIALGS----------VSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR
4	PPA-I	2p1rA	0.806	0.946	3.677	threading_4	-ANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVETVIAGGGDGTINEVSTALIQIRDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGN---AEIDAVND-KTCFINATGGFGTRIT---------TLGGVSYLIHGLRDT--LTPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLTQSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLLR
5	HHPRED-l	2bon_A	1.000	0.950	7.355	threading_5	----PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRI----------ALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLL-
6	HHPRED-g	2bon_A	1.000	0.953	7.170	threading_6	----PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRI----------ALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR
7	SP3	3t5pa	0.262	0.933	5.874	threading_7	KTKFEKVLLIVNPKAGQGTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFA-SKVDLIIVFGGDGTVFECTNGLAPLE--IRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANG-QHFLNFWGIGL-----------VKAKLGKIGYYLSTIRTVKNAETFPVKITYDGQVYEDEAVLVVG-NGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIGFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCQIELLQGHFTIYNPA--VV--
8	SAM-T99	2qv7A	0.288	0.906	5.329	threading_8	GSHRKRARIIYNPTSGKERELPDALIKLEKAGYETSAYATEKIGDATLEAERAHEN-YDVLIAAGGDGTLNEVVNGIAEKPNR--PKLGVIP-GTVNDFGRALHIPNDI-GALDVIIEGHSTKVDIGK-NNR-YFINLAAGGQLTQ-------------GPFAYYIKGFELPQK--AVDLRIEYDGNVFQGEALLFFLGLTNSA-GFEKLVPDAKLDDGYFTLIIVEKSNLAELGHITRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGGKLPANFLNLERHIDVFAPND-----
9	MUSTER	3s40A	0.261	0.883	2.553	threading_9	KTKFEKVLLIVNPKAGQGTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFAS-KVDLIIVFGGDGTVFECTNGLAPLEI--RPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANG-QHFLNFWGIG------------------KIGYYLSTI------ETFPVKITYDG-QVYEDEAVLVVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGFKDYIGKKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDSSL--HTPCQIELLQGHFTIYNPAVV----
10	SPARKS	2bona	1.000	0.953	5.567	threading_10	----PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRI----------ALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.966 to 2p1rA TM-score=0.937 to native SCOP code=e.52.1.2	TM-score=0.964 to 2p1rA TM-score=0.933 to native SCOP code=e.52.1.2	TM-score=0.816 to 2qv7A TM-score=0.804 to native SCOP code=e.52.1.2	TM-score=0.920 to 2p1rA TM-score=0.993 to native SCOP code=e.52.1.2	TM-score=0.964 to 2p1rA TM-score=0.931 to native SCOP code=e.52.1.2

Experimental Structure

Download 2bonA

SCOP code=e.52.1.2