Template-based Modeling Results for YEGD_ECOLI

Submitted Primary Sequence

>Length 450
MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFISNELATLISQRGLESALSQPLTRILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFISNELATLISQRGLESALSQPLTRILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
CEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCEEEEECCCCCEECHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFISNELATLISQRGLESALSQPLTRILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
200000100000000002222020021333221010000022331002211222323133321200011012223233121103203111100121132232000021131112131232221011310000002101210132143212200001000011222321111011001300440102100000100000121302243322000000110000000010124243423220100011002010210010000210020012102233222122111110000100101121212210210220022132232022013002221112012002201121132220202031122301120012002200230022012002300330533111000000112011012001320232312211210000000021011114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFISNELATLISQRGLESALSQPLTRILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
1	MUSTER	3iucC	0.228	0.818	2.371	threading_1	TVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKV------VEKKT--------KPYIQVDIGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYF--------NDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLD-KGEKNILVFDLGGGTFDVSLLTID-------NGVFEVVATNGTHLGGEDFDQRVMEHFIKLYKK----KT-GKDVRKD-----------------------------------------------NRAVQKLRREVEKAKRALSSQHQARIEIEYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKIDEIVLVGGSTRIPKIQQLVKEFFGKEPSRGINPDEAVAYGAAVQAGVLSG
2	SPARKS	3c7na	0.203	0.822	6.726	threading_2	TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVEL-------------DDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWY-----TEEQRYNIADAARI---AGLNPVRIVNDVTAAGVSYGIFKTKPRIVAFVDIGHSSYTCSIMAFK-------KGQLKVLGTACKHFGGRDFDLAITEHFADE-----FKTKYKIDIREN-----------------------------------------------PKAYNRILTAAEKLKKVLSANTNAPFSVEMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHLR
3	PROSPECT2	1dkgD	0.263	0.811	3.184	threading_3	KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPF---------------KIIAADNGDAWVEV--KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYF-----NDAQRQAT---KDAGRIAGLEVKRIINEPTAAALAYGLDKTGNRTIAVYDLGGGTFDISIIEID-------EKTFEVLATNGTHLGGEDFDSRL-----INYLVEEFKKDQGIDLRN-----------------------------------------------DPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVL-T
4	PPA-I	3iucC	0.231	0.818	4.024	threading_4	TVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPF--------------KVVEKKTKPYIQVDIGGGQKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFN--------DAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLD-KGEKNILVFDLGGGTFDVSLLTID-------NGVFEVVATNGTHLGGEDFDQRVMEHFIKLYKKKTG-----KDVRKD-----------------------------------------------NRAVQKLRREVEKAKRALSSQHQARIEIEYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKIDEIVLVGGSTRIPKIQQLVKEFFGKEPSRGINPDEAVAYGAAVQAGVLSG
5	HHPRED-l	1yuw_A	0.207	0.818	5.642	threading_5	PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDA--------------GRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTN--------AVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAERNVLIFDLGGGTFDVSILTIAAG-------IFEVKSTAGTHLGGEDFDNRMVNHFIAEF-----KRKHKKDISE-----------------------------------------------NKRAVRRLRTACERAKRTLSSSTQASIEIDSEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLQIHDIVLVGGSTRIPKIQKLLQDFFNKELNKSINPDEAVAYGAAVQAAILS-
6	HHPRED-g	1yuw_A	0.222	0.820	4.399	threading_6	MSVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV------ND--------AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYF-----NDSQRQAT---KDAGTIAGLNVLRIINEPTAAAIAYGLDKGAERNVLIFDLGGGTFDVSILTIA-------AGIFEVKSTAGTHLGGEDFDNRMV-----NHFIAEFKRKHKKDISENK-----------------------------------------------RAVRRLRTACERAKRTLSSSTQASIEIDYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDIHDIVLVGGSTRIPKIQKLLQDFFNKELNKSINPDEAVAYGAAVQAAILSG
7	SP3	1bupa	0.215	0.818	6.623	threading_7	PAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVND--------------AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYF-----NDSQRQATKDAGTI---AGLNVLRIINEPTAAAIAYGLDKKAERNVLIFDLGGGTFDVSILTIE-------DGIFEVKSTAGTHLGGEDFDNRMVNHFIAEFKRKH-----KKDISEN-----------------------------------------------KRAVRRLRTACERAKRTLSSSTQASIEIDYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLQIHDIVLVGGSTRIPKIQKLLQDFFGKELNKSINPDEAVAYGAAVQAAILS-
8	SAM-T99	2v7yA	0.255	0.758	5.785	threading_8	KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-NGERLVGEVAKRQAITNP-NTIISIKRHMGTDYKV----------------------------------------EIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYF--------NDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELG-------DGVFEVKATAGNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKM----------------------------------------ALQR------------LKDAAEKAKKELSGVTQTQISLPFIPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLDIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAG
9	MUSTER	1yuwA	0.217	0.820	1.707	threading_9	PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMV------VNDA--------GRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYF--------NDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAERNVLIFDLGGGTFDVSILTIA-------AGIFEVKSTAGTHLGGEDFDNRMVNHFIAEFKR----KH-KKDISEN-----------------------------------------------KRAVRRLRTACERAKRTLSSSTQASIEIDYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDIHDIVLVGGSTRIPKIQKLLQDFFGKELNKSINPDEAVAYGAAVQAAILSG
10	SPARKS	2qxla	0.200	0.822	6.653	threading_10	TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVEL-------------DDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWY-----TEEQRYNIADAARI---AGLNPVRIVNDVTAAGVSYGIFKTKPRIVAFVDIGHSSYTCSIMAFK-------KGQLKVLGTACKHFGGRDFDLAITEHFADEFKTK-----YKIDIREN-----------------------------------------------PKAYNRILTAAEKLKKVLSANTNAPFSVEMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.719 to 1yuwA SCOP code=b.130.1.1	TM-score=0.658 to 1yuwA SCOP code=b.130.1.1	TM-score=0.704 to 1jcfA SCOP code=c.55.1.1	TM-score=0.708 to 1yuwA SCOP code=b.130.1.1	TM-score=0.723 to 1yuwA SCOP code=b.130.1.1