Template-based Modeling Results for YEDW_ECOLI

Submitted Primary Sequence

>Length 223
MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK
CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCCEEEEECCEEEECCHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK
2100012124300200120034211100001103100100242210000000101212002002002423400000000321120202102110100001001020000002110223322321020010200122110112421020133101001000222121001210012001020312110000002101320343223400000111001022255
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK
1	MUSTER	1ys6B	0.353	0.991	3.929	threading_1	PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ--
2	SPARKS	3r0ja	0.310	0.969	4.207	threading_2	ARVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVPG---DGFGVLRRLRADGDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGK-NVRLTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDFGGDVNVVESYVSYLRRKIDTG-EKRLLHTLRGVGYVLREP--
3	PROSPECT2	3r0jA	0.310	0.969	4.792	threading_3	ARVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVPG---DGFGVLRRLRADGDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGK-NVRLTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDFGGDVNVVESYVSYLRRKIDTG-EKRLLHTLRGVGYVLREP--
4	PPA-I	1ys6B	0.353	0.991	4.484	threading_4	PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRADNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ--
5	HHPRED-l	2gwr_A	0.366	0.955	3.037	threading_5	QRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDL-LPG-NGIDVCRVLRADSGVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDDEAE-LSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDENPTVVLTVRGVGYKAGPP--
6	HHPRED-g	1kgs_A	0.372	0.928	2.708	threading_6	VRVLVVEDERDLADLITEALKKE-FTVDVCYDGEEG---ALNEPFDVVILDI-LPVHDGWEILKS-RESVNTPVL-LTALSDVEYRVKGLN-GADDYLPKPFDLRELIARVRALIRRKSEKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLV-NKNRVVTKEELQEHLW-----VFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGIGYVARDE--
7	SP3	3r0ja	0.310	0.969	4.119	threading_7	ARVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVPG---DGFGVLRRLRADGDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAG-KNVRLTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDFGGDVNVVESYVSYLRRKIDTG-EKRLLHTLRGVGYVLREP--
8	SAM-T99	1ys6B	0.355	0.987	3.527	threading_8	-RVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ--
9	MUSTER	3r0jA	0.310	0.969	3.626	threading_9	ARVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVPG---DGFGVLRRLRADGDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGK-NVRLTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDFGGDVNVVESYVSYLRRKIDTG-EKRLLHTLRGVGYVLREP--
10	SPARKS	1ys6a	0.342	0.982	4.180	threading_10	PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ--

Predicted Tertiary Structure


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TM-score=0.972 to 1ys6B SCOP code=a.4.6.1	TM-score=0.970 to 1ys6B SCOP code=a.4.6.1	TM-score=0.680 to 1nxwA SCOP code=c.23.1.1	TM-score=0.680 to 1nxwA SCOP code=c.23.1.1	TM-score=0.970 to 1ys6B SCOP code=a.4.6.1