Template-based Modeling Results for YEDJ_ECOLI


  Submitted Primary Sequence

>Length 231
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
443320121012002311542321000100210011013003323121100000000010121232323333011100210220033213312231020002002111122322221120200100120211101000100000012122212132221332323113100210121013013112023022102201200120022003202233321233012212324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
1MUSTER3gw7A0.9190.9052.353threading_1-----------QHWQAQFE-NWLKNHVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSQRS--------SILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDD--YALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
2SPARKS3gw7a0.9140.9055.450threading_2-----------QHWQAQFENW-LKNHVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSQRSS--------ILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDD--YALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
3PROSPECT23gw7A0.9190.9052.203threading_3QHWQAQF------------ENWLKNHVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSQRSS--------ILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDD--YALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
4PPA-I3gw7A0.9190.9052.469threading_4-----------QHWQAQF-ENWLKNHVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSQRS--------SILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDD--YALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
5HHPRED-l3gw7_A1.0000.9005.572threading_5---QHWQAQFENWLKNH---------VCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVS--------QRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDD--YALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSA-
6HHPRED-g3djb_A0.3350.7754.545threading_6-TKQEKIEKTITFVKHILEKDASGHDWYHIRRVHK-AISLSEQEGGNRFIIE-AALLHDVAD--LN-ESE----EAG-KKVSDWLEELH--VEEEESKHVLHIIAN----------SIEGKLVQDADRLDALGAIGIARTFAYGGAKGRL-YDPTIPPR---------PSLNHFYEKLLKLKDL-NTNAAKQEAEVRHRY-EQFIEQF-KEWNAQ----------------
7SP33gw7a0.9140.9055.509threading_7-----------QHWQAQFENW-LKNHVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSQRSS--------ILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDD--YALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
8SAM-T993gw7A0.9090.9054.940threading_8-----------QHWQAQFENWLKNH-VCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSQRSS--------ILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDYA--LDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG
9MUSTER2pjqB0.2690.8702.159threading_9IT-ETQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVILAN---------PAKAHQDLIVQLNAQ--NVTADDQTAIFAIIDHSFSKNGPQKLSLEGQVVQDADRLDAIGAIGIARALYYSGHVGEKIYDPAIAPRREQYRHQPGTAINHFYEKLFKLAA-LNTDTAKALAAHRTA-VHEFVDQFKAEWTAD----------------
10SPARKS2pjqa0.2870.8444.579threading_10IT-ETQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDAHQDL----------------IVQLNAQNVTADDQTAIFAII-DHSFSNGPQKLSLEGQVVQDADRLDAIGAIGIARALYYSGHVGEKIYDPAIAPRREQYRHQPGTAINHFYEKLFKLAA-LNTDTAKALAAHRTA-VHEFVDQFKAEWTAD----------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.762 to 3b57A
TM-score=0.988 to native
SCOP code=a.211.1.1		 TM-score=0.762 to 3b57A
TM-score=0.987 to native
SCOP code=a.211.1.1		 TM-score=0.760 to 3b57A
TM-score=0.989 to native
SCOP code=a.211.1.1		 TM-score=0.764 to 3b57A
TM-score=0.985 to native
SCOP code=a.211.1.1		 TM-score=0.762 to 3b57A
TM-score=0.988 to native
SCOP code=a.211.1.1

  Experimental Structure

Download 3gw7A
SCOP code=a.211.1.1