Template-based Modeling Results for YECE_ECOLI

Submitted Primary Sequence

>Length 272
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
CEEEECCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
20000003111231231002101100320200101110211131300120133023201000200220012221330320022002101200400000002011211141020012003202230200010123311131311210120022210010111122121132123001103233131111010112000000001222221331022002101212431200000001121200200210031024202311212222322223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
1	MUSTER	1ztvA	0.225	0.915	2.412	threading_1	MIRLGLTSFSEHDYLTGKKRTLYEYASHLPLVEMDTAYYGIPPKERVAEWVKAVPENFRFVMKVYSGISCQGEWQTEEEMITAFLESMAPLIESLFAFLVQFSGTFGCKENVAYLQKIRHWFKDLPIAIELRNNSWYQPN-FVKQMLQFMKENQFSLVIVDEPQIP---------------TNPVPFYPYVTNNLVLFRFHGRNAYHYNTQEIADLSEAVLKMSQAKEVGVIFNNNSGGDAAENALQMQKVLNLSYDDLN-----PKQLD--
2	SPARKS	1vpqa	0.216	0.849	5.026	threading_2	MVYVGTSGFSFEDWKGVVYQFLKYYWAVFRIVELNFTYYTQPSWRSFVQMLRKTPPDFYFTVKTPGSVTHVKEGKDPKEDMENFTRQIEPLIQRLKMTLAQFPFSFSRKNVEYLEKLRESYP--YELAVEFRHYSWDRE-----ETYEFLRNHGITFVVVDEPKLPGL----------------FPYRPITTTDYAYFRFHGRNERWYSEEELKTLFEDVVELRRVKETYVFFNNCYKGQAAINALQFKKMLEE------------------
3	PROSPECT2	1vpqA	0.216	0.849	3.232	threading_3	MVYVGTSGFSFEDWKGVVYPFLKYYWAGFRIVELNFTYYTQPSWRSFVQMLRKTPPDFYFTVKTPGSVTHVLWGKDPKEDMENFTRQIEPLIERLKMTLAQFPFSFSRKNVEYLEKLRESYP--YELAVEFRHYSWDR-----EETYEFLRNHGITFV----------------VVDEPKLPGLFPYRPITTTDYAYFRFHGRNERWFSEEELKTLFEDVVELSRVKETYVFFNNCYKGQAAINALQFKKMLEE------------------
4	PPA-I	1ztvA	0.208	0.919	3.260	threading_4	MIRLGLTSFSEHDYLTGKKRTLYEYASHLPLVEMDTAYYGIPPKERVAEWVKAVPENFRFVMKVYSGISCQGEWQSEEEMITAFLESMAPLIESLFAFLVQFSGTFGCKENVAYLQKIRHWFKDLPIAIELRNNSWYQPN-FVKQMLQFMKENQFSLVIVDEPQIPTNPVPFYPY--------------VTNPNLVLFRFHGRNAAGYNTQEIADLSEAVLKMSQAKEVGVIFNNNSGGDAAENALQMQKVLNLSYDDLNPKQLD-------
5	HHPRED-l	1vpy_A	0.227	0.809	9.459	threading_5	-IRLGLTSFS---------STLYEYASHLPLVE-DTAYYGIPPKERVAEWVKAVPENFRFV-KVYSGISCQGEWQTEEE-ITAFLES-APLSKKLFAFLVQFSGTFGCENVAYL-QKIRHWFKDLPIAIELRNNSWYQPNFV-KQ-LQF-KENQFSLVIVDEPQIPT---------------NPVPFYPYVTPNLVLFRFHGRNAYHYNTQEIADLSEAVLK-SEAKEVGVIFNNNSGGDAAENALQ-QKVLNLS-----------------
6	HHPRED-g	1vpy_A	0.232	0.809	8.033	threading_6	-IRLGLTSFS----------TLYEYASHLPLVE-DTAYYGIPPKERVAEWVKAVPENFRFV-KVYSGISCQGEWQTYEE-ITAFLES-APLSKKLFAFLVQFSGTFGCTENVAYLQKIRHWFKDLPIAIELRNNSWYQPNFVKQ--LQF-KENQFSLVIVDEPQI---------------PTNPVPFYPYVNPNLVLFRFHGRNAYHYNTQEIADLSEAVLK-QEAKEVGVIFNNNSGGDAAENALQ-QKVLNLS-----------------
7	SP3	1vpqa	0.216	0.849	5.249	threading_7	MVYVGTSGFSFEDWKGVVYQFLKYYWLGFRIVELNFTYYTQPSWRSFVQMLRKTPPDFYFTVKTPGSVTHVKEGKDPKEDMENFTRQIEPLIERLKMTLAQFPFSFSRKNVEYLEKLRESYP--YELAVEFRHYSWDRE-----ETYEFLRNHGITFVVVDEPKL----------------PGLFPYRPITTTDYAYFRFHGRNERWYSEEELKTLFEDVVELSRVKETYVFFNNCYKGQAAINALQFKKMLEE------------------
8	SAM-T99	1vpqA	0.214	0.842	6.640	threading_8	MVYVGTSGFSFEDWKGVVYPFLKYYWAVFRIVELNFTYYTQPSWRSFVQMLRKTPPDFYFTVKTPGSVTHVLWGKDPKEDMENFTRQIEPLIERLKMTLAQFPFSFKFSRKN--VEYLEKLREPYELAVEFRHYSWDRE-----ETYEFLRNHGITFVVVDEPKLPGL----------------FPYRPITTTDYAYFRFHGRNERWYSEEELKTLFEDVVELSRVKETYVFFNNCYKGQAAINALQFKKML--------------------
9	MUSTER	1vpqA	0.216	0.849	2.312	threading_9	MVYVGTSGFSFEDWKGVVYPFLKYYWAVFRIVELNFTYYTQPSWRSFVQMLRKTPPDFYFTVKTPGSVTHWKEGKDPKEDMENFTRQIEPLIEELKMTLAQFPFSFKRKNVEYLEKLRESYP--YELAVEFRHYSWDR-----EETYEFLRNHGITFV----------------VVDEPKLPGLFPYRPITTTDYAYFRFHGRNDYLYSEEELKTLFEDVVELSRVKETYVFFNNCYKGQAAINALQFKKMLEE------------------
10	SPARKS	1vpya	0.204	0.831	3.957	threading_10	HIRLGLTSFSS---------TLYEYASHLPLVE-DTAYYGIPPKERVAEWVKAVPENFRF-VKVYSGISCQGEWQASEEEITAFLESAPLISKKLFAFLVQFSGTFGCKENVAYLQKIRHWFKDLPIAIELRNNSWYQPNFVKQLQ---FKENQFSLVIVDEPQIPTNPVPFYPYV--------------TNPNLVLFRFHGRNAAGYNTQEIADLSEAVLKSQEAKEVGVIFNNNSGGDAAENALQQKVLNLS------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.791 to 1vpqA SCOP code=c.1.32.1	TM-score=0.790 to 1vpqA SCOP code=c.1.32.1	TM-score=0.849 to 1vpqA SCOP code=c.1.32.1	TM-score=0.849 to 1vpqA SCOP code=c.1.32.1	TM-score=0.789 to 1vpqA SCOP code=c.1.32.1