Template-based Modeling Results for YECD_ECOLI

Submitted Primary Sequence

>Length 188
MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL
CCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCEEEEEEHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL
44413141000000002200022212122032003100300210241300000010012222230132213221223122332131122111232100011211001210102100342312100000000100010001202421010000210011012200110021023100101103200422
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL
1	MUSTER	1j2rA	0.995	1.000	3.784	threading_1	MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGTTDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL
2	SPARKS	3txya	0.433	0.995	4.061	threading_2	IPTLNP-TVALVAIDLQNGIVVLPMVPQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWSTDAQTFALTQIFPKLGQVATAADVEAAL
3	PROSPECT2	3txyA	0.420	1.000	3.924	threading_3	SIPTLNPTVALVAIDLQNGIVVLPMVPQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWSTDAQTFALTQIFPKLGQVATAADVEAAL
4	PPA-I	1j2rA	0.995	1.000	4.531	threading_4	MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGTTDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL
5	HHPRED-l	1j2r_A	0.995	0.995	3.298	threading_5	MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGTTDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNA-
6	HHPRED-g	2fq1_A	0.209	0.995	3.220	threading_6	DWAFEPQRAALLIHDMQDYFVSFWGENPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLN-DMWGPGLTRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAP
7	SP3	3txya	0.433	0.995	4.314	threading_7	IPTLNP-TVALVAIDLQNGIVVLPMVPQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWSTDAQTFALTQIFPKLGQVATAADVEAAL
8	SAM-T99	1j2rA	0.995	1.000	3.697	threading_8	MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGTTDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL
9	MUSTER	3txyA	0.433	0.995	3.546	threading_9	IPTLNP-TVALVAIDLQNGIVVLPMVPQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWSTDAQTFALTQIFPKLGQVATAADVEAAL
10	SPARKS	3ot4a	0.217	0.979	3.663	threading_10	ALPL-KAPYGLLIVDFVNGFADPAQGGGNIAAAIETTRTVLAAARERGWAVAHSRIVYADDDADGNIFSIKVPMLTLKEHAPASAIVPQLAPQAGEYVVRKSTPSAFYGTMLAAWLAQRGVQTLLVAGATTS-GVRASVVDAMSAGFRPLVLSDCVGDRALGPHEANLFDMRQKYAAVMTHDEALA--

Predicted Tertiary Structure


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TM-score=0.998 to 1j2rA TM-score=0.998 to native SCOP code=c.33.1.3	TM-score=0.998 to 1j2rA TM-score=0.998 to native SCOP code=c.33.1.3	TM-score=0.947 to 1j2rA TM-score=0.947 to native SCOP code=c.33.1.3	TM-score=0.941 to 1j2rA TM-score=0.941 to native SCOP code=c.33.1.3	TM-score=0.998 to 1j2rA TM-score=0.998 to native SCOP code=c.33.1.3

Experimental Structure

Download 1j2rA

SCOP code=c.33.1.3