Template-based Modeling Results for YECA_ECOLI

Submitted Primary Sequence

>Length 221
MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH
CCCCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH
55323123310210120024132322012022010001001101331213200110111232233222331022002101310120032023113201200112223123220021001000200011101200211210110011212332022013101210220021021101111111101111211221232333323212020122330320025
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH
1	MUSTER	2vdaA2	0.123	0.733	1.078	threading_1	V-SETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDDLDLPIAEWLDKE-------PELHEETLRERILAQSIEVYQRKEEVVG-------------------AEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEE--------------------------------
2	SPARKS	1m6na	0.114	0.910	0.896	threading_2	FDS----RKQLLQYDDVLRQQKQRFEVIDSENLREIVENMIKSSAAYTPREELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKEEQFG-KEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQEG---------------
3	PROSPECT2	1oyzA	0.045	1.000	1.132	threading_3	YRKASKEYGLYNQDDELFRLLDDHNSLKRISSAQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDTLYKFDDNEIITSAIDS
4	PPA-I	1nktA4	0.120	0.751	0.916	threading_4	-------------YDEVMNQQAERRRILEGENLKDQALDMVRD-----VITAYVDGATGEGYAEDWDLDALWTALKTLYPVGITTLLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAQRDPLVEYQREGYDMFMAMLDGMKEESVGFLFNVTV-------------------------------------
5	HHPRED-l	1tf5_A	0.123	0.738	5.850	threading_5	MDDDVLRQQIYKQRFEVIDSENLREIVE--NMIKSSLERAIYTPREELPEEWKLDGYLDEADIFGKEPDEMLELIMDRIITKYNEKEEQFG------------------K-EQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPEYQMEGFAMFEHMIESIEDEVAKFVMKAEI-------------------------------------
6	HHPRED-g	1tf5_A	0.153	0.828	6.634	threading_6	MDDSPISRKQLLQYDDVLRQYKQRFEVIDSENLREIVENMIKSSLAYTPREELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKEEQFGKEQMREFEKVIVLRAV-DSKWMDHIDAMDQLRQGIHLRAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKAEI-------------------------------------
7	SP3	1m6na	0.117	0.928	0.629	threading_7	IQSKMVSRKQLLQYDDVLRQQKQRFEVIDSENLREIVENMIKSSAAYTPREELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKEEQFG-KEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQE----G-----------
8	SAM-T99	2vdaA2	0.149	0.729	3.730	threading_8	DVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPAEWL-------DKEPELHEETLRERILAQSIEVYQRKEEVVGEMMRHFEKGVMLQTLDSL--------------------WKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESMFAAMLESLKYEVISTLSKVQVRMPE---------------------------------
9	MUSTER	3dinA2	0.121	0.674	0.901	threading_9	---KDYDEYLKDIFEDVVSTRVEEFCSGKNWDIESLKNSLSFFPAGLF----------DLDEKQFSSSEELHDYLFNRLWEEYQRKKQEIGEDYRK--------------------VIRFLMLRIIDDHWRRYLEEVEHVKEAVQLRSQKDPIVEFKKETYYMFDEMMRRINDTIANYVLRV---------------------------------------
10	SPARKS	3m1ic	0.087	0.986	0.571	threading_10	LEQGS-SSSLIVATLESLLRYLPYRYIYETNILELLSTKFMTSPD--TRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQKIEERELFKTTLDYWHNLVADLFYEKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGREFVKESDTIQLYK

Predicted Tertiary Structure


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TM-score=0.662 to 1nktA SCOP code=a.162.1.1	TM-score=0.567 to 1nktA SCOP code=a.162.1.1	TM-score=0.710 to 1nktA SCOP code=a.162.1.1	TM-score=0.755 to 1oyzA SCOP code=a.118.1.16	TM-score=0.742 to 1nktA SCOP code=a.162.1.1