Template-based Modeling Results for YEBZ_ECOLI

Submitted Primary Sequence

>Length 290
MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGIWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGIWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGIWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF
43200100000000000000000000000002221231012101300100000000000010001002112010100002001001303100000000000000000000223312200000000000010000100012011010000010000000000000000000002113231222012002300200100000000100000010111112121210000001000000000000011000012133333300110000010000000000000001121234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGIWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF
1	SPARKS	1ee4a	0.104	0.959	1.015	threading_1	VVPRLVEFMEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGFNSNKPSLIRTATWTLSNLCR-GKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLQEAIQAVIDV---RIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPK--------ENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVDKTKKEACWAISNASSGGLQRPDI
2	PROSPECT2	1ejlI	0.107	1.000	1.568	threading_2	QLQATQAARKLLSIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIAISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNTAGRQDQIQQVVTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKL
3	PPA-I	3zuxA	0.127	0.869	1.030	threading_3	LWAALFAAAAFFAYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLP---AEIAVGVILVGCCPGGTASNVMTYLAVALSVAVTSVS-----TLTSPLLTPAIFLMLAGEMLEIQA--AGMLMSIVKMVLLPIVLGLIVHKVLG----------SKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIM---------ESGLLIFAVVVLHNGIGYLLGFFAAKWTG---------LPYDAQKALTIEVGMSGLAAALAAAHFAAAPV
4	HHPRED-g	3o0r_B	0.116	0.955	1.155	threading_4	FPAIPFNVARMVHTNL-LIVWLLFGAAYYLVPEESCELYSPKLAWILFWVFAAAGVLTILGYLLPYAGLGNELWP--TMG-R-EF--LEQP--TISKAGIVIVALLMTVLRGRKTAIMVLMTGLIGLALLFWVVHLWVEELI--MGAILAFVLVKEVIEKWLYVIIAMALIIHFGVPGYWDYPNRAVALWAMGTTVMFLGAGVWGFMHTLAPVN--YYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGMDNRSQVLEMWGFWLAMVFITLFLSAAGVLQRMMTF
5	PROSPECT2	1ee4a	0.114	1.000	1.503	threading_5	QLSATVKFRQILPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIAAQTKVVVDADAVPLFIQLLYTGSVEVDSTDYRDYVLQCNAMEPPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKEGNTEQIQAVIDANLIPPLVKLEACWAISNASSGGLQRPDIIRYLVSIEVTLDALENILKMGEADKEARGLF
6	PPA-I	1t33A	0.106	0.745	1.018	threading_6	-----------------------------MNIPTTTTKGEQAKSQLIAAALAQFGEYTTRDIAALAGQ---------NIAAITYYFGS------KEDLYLACAQWIADFL----GEKFRPHAEKAERLFSQPAPDRDA---IRELILLACKNMIMLLTQEDTVNLSKFISREQLSPT----SAYQLVHE----QVIDPLHTHLTRLVAAYTGCDAND------TRMILHTHALLGEVLAFRLGKETIL-LRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ--------
7	HHPRED-g	3mk7_A	0.134	0.952	1.065	threading_7	FDPTSFGRLRPLHTNAVIALFATSY---YSVQRTCQTLFAPKLAAFTFWGWQLVILLAALTVAIHVNNLEMKSYSGATDAMVQWYGHNAVGFFLTAFLGIMYYFVPKQAERPVYSYRLSIVHFWALTVYIWAGPHHLHYTALPDWAQSLGMV---MSL---ILLAPSWGGMIMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNAL-SHYTDW-TIGHVHAGALGAMVSIGAL--YHLVPKVFGREMHSIG-LINTHFWLATIGTVSMWVNGIAGAINSF
8	PROSPECT2	3a0oA3	0.090	0.917	1.453	threading_8	NHCGWAEFYEIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVADEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTRHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWGGWAEGPHYWMTGMAYLIEAANLIRSYIGYDLY-----------------QRPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNY-------GWWDLNFDDLVYRHDYPQVEAV
9	PROSPECT2	3kb9A	0.076	0.959	1.449	threading_9	AVKLQETTRTWLKVEEYADGLCYTDLMAGYYLGAPDEVLQ--------AIADYSAWFFVWDDRHDRDIVHGRAGAWLRGLLHTALDSPGDHLHHEDTLVAGFADSVRRLYAFLPATWNARFARHFHTVIEAYDREFHNRT--RGIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEVHNLTLEEAIGEVRRRVEECITEFLAVERDAL--RFADELADGTVRGKELSGAVRANVGNMRNWFSSVYRSTPPY
10	PROSPECT2	1jdha	0.138	1.000	1.445	threading_10	SPQMVSAIVRTMQGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLAKMAVRLAGGLQKMVALLNKTNVKFLNQESKLIILASGGPQALVEKLLWTTSRVLKVLSVCSSNKPAIVLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLINVVTCAAGIGGIEALVRTVLRAGDREDEPAICALRHLTSEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTMEEIVEGCTGALHILVAAGVLCELAQD

Predicted Tertiary Structure


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TM-score=0.474 to 2p61A SCOP code=a.24.29.1	TM-score=0.761 to 1ialA SCOP code=a.118.1.1	TM-score=0.704 to 1ialA SCOP code=a.118.1.1	TM-score=0.446 to 1pw4A SCOP code=f.38.1.1	TM-score=0.591 to 1ocrN SCOP code=f.24.1.1