Template-based Modeling Results for YEBS_ECOLI

Submitted Primary Sequence

>Length 427
MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
CCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCEEECCCCCCCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHEECCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
5533233222233121311233122200010120100021231332220101103020121332112100000000000000010010110101112010100200110032221100000000000000000000000000231222020000002302310000000000000001023002010000000000000000001120013100220133312233333021010011012333413012021213234320120000000000000001100110002111123321011000000223110000000000000001000000000002131331231100001001100200000000000000002233001010010000000000000001210001000202342324344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
1	MUSTER	3gjxA	0.106	0.927	0.955	threading_1	WPKHWPTFISDI-VGASRTSESLCQNNMVILKLSEEVFDFSSGQITQ-VKAKHLKDSMCNEFSQIFFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNVMFRNVSLKCLTEIAEQFETLFTLTMMQLKQMLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQL-LEKRLNLREALMEALHYMLLVSEVECLEYWNHLAAELYRESPFSTSAS-----PLLSGSQHFDIP------------PRRQLYLTVLSKVRLLMVSRMKPLVVENDQGEVMKDTDSINLYKNMRE-----TLVYLTHLDYVDTEIIMTKKLQNQVN-GTEWSWKNLNTLCWAIGSISG-EDEKRFLVTVIKDLLG---LCEQKRGKDNKAIIASNIMYIVGQYP-HWKFLKTVVNKEFMHETH
2	SPARKS	2xwub	0.084	0.925	1.141	threading_2	LEVPLQDCEALIQAAFAALQDSELFDSSVEA--IVNAISQPDAQRYVNTLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLD-QVEHWQSFLALVNMIMFCTGNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHAQFKEQFRIYRVDISDTLMYVYEML----GAELLSNLYDKLGRLLWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQ-----------------LADTVMFTIGALSEWLPVMINSVLPLVLHALGNPELSVSSVSTLKK------ICRECKYDLPPY--AANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSAKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISLQQVFQLIQKVLSKWLN
3	PROSPECT2	1xm9A	0.082	0.831	1.724	threading_3	-------------------GLTIPKVQYLSSQDEKYIQHTCFQDESAKQQVYQLGGKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNG-----IREAVSLLRRTGNAEIQKQLLIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLADAGRQTMLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEE---------------------------------ETNPKGSGWLYHSDAIRTYLNLMGK-----------SKKDATLEACAGALQNTASKGLMSSGMSQLIGLKEKGLPQIARL----LQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLLLSDMWSSKELQGVL
4	PPA-I	3g61A4	0.080	0.646	1.258	threading_4	-----------------------------------------------------------------------------------------------------------------------LTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAELERYNNNLEEAKRLGIKKAITA-------NISMGAAFLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFWRI----------------LKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYPKNTTGALTTRLANDAAQVK--GATGSRLAVIFQNIANLG-------TGIIISLIYFENVLLVFSAIVFGAMAVGQVSSFAPDYAK
5	HHPRED-l	2f9y_B	0.123	0.496	1.158	threading_5	--------------------------VWTKCDSCGQVLYRAELERNLE-VCPKCDHHMR---MTARNRLH--------SLLDEGSL--VELGSLKFRMKGTLYGMPVVAAAFEFAFMGGSMGSVV----GARFVRAVEQALEDNCPEALMSLM---------QMAKTSAALAKMQERGISVLTDPTMGGVSASFAMLGDLNIAEPIGAGPRVIEQTVR-EKLPP--GFQ-----------RSEFLIEKGAIDMIV-RRP--EMRLKLAS-ILAKLMNLPAPNP------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	2k4x_A	0.204	0.126	0.937	threading_6	MQ----------KRELYEIADGKLVRKHRFCPRCGPVFLA---EHADRYSCGRCGYTEFKKAKKSKS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SP3	3s7ba	0.101	0.925	0.481	threading_7	RA--LQPFQVDLLFSCPAYAYVLTVNERNHCEYC--FTRKEGLSK-----CGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWPSETVRLT-------ARILAKQKIHPERTPSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLEFPDNDSLVVLFAQVNCNG-FTIEDEELSHLGSAIFPDVALMNHSCCVIVTYKGTLAEQEIKPGEEVFTSYIDLLYPTEDRLRDSYFFTCECQECTTKDKDKAKVEIRKPKAEAIRDMVRYARNVIEEFRRAKHYKSPSE--LLEICELSQEKMSSV-----FEDSNVYMLHMMYQAMGVCLYMQDWEGALQYGQKIIKPYSKHPLYS-LNVASMWLKLGRLYM-GLEHKAAGEKALKKAIAIMEVAH---GKDHPYISEIKQEIESH---
8	SAM-T99	1ivsA3	0.171	0.328	1.000	threading_8	----SRAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEVE----ATCSRCGTP---------------------------------------------------------IEYAIFPQWWLRMRPLAEEVLKGLRRGDIFVPRWKKVNMDWLENVKDWN--------------------------------------------ISRQLWWGHQIPA----------WYCEDCQAVNVPEDPTSCEACGSPRLKRD------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1u6gC	0.119	0.965	0.868	threading_9	IGEYLEKIIPLV---VKFCNVDDDELREYCIQAFESFVRRKEVYPHVSTIINICLKYLTYDMSWKVRRAAAKCLDAVVS-MLPEFYPALISRFKEREENADVFHAYLSLLKQQSQVPNIVKALHKQMVKTRQCCFNMLTELVNVLPGAIPVLVPGIIFSLN-SNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVG-FYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTC--------TIKRLKAAIDQEVKERAISCMGQIICNLGDNLLQIFLERLKNEITRLTTVKALTLIAGSPLKIDGVPILASFL-RALKLGTLSALDILIKNSDSLTAAMIDAVLDLPPLISEMHVSQMAISFLTTLAKVYPSSLLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQTH
10	SPARKS	1a4ya	0.118	0.850	0.936	threading_10	VRLDDCGLTEARCKDISSALRVNPALAELNLRSNELVHCVLQGLQT-----PSCKQKLSLQN-CCLTGAGCGVLSSTLRTLPT----LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYC----SLSAASCEPLASVLRAKPDFKEL-----TVSNNDINEAGVRVLCQGLKDSPKLESCGVTSDNCRDLCGIVASKASLRELAGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDRAKESLKE-LSLAG-NELGDEGARLLCETLL-------------EPGCQLES------LWVKSCSFTAACCSHFSSVLARFLLELQI--------SNNRLEDAGVRELCQGLGWLADCDVSDSSCSSLAATLLANHSLRELD----------------LSNNCLGILQLVESVRQPGCLLEQ

Predicted Tertiary Structure


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TM-score=0.564 to 3ea5B SCOP code=a.118.1.1	TM-score=0.818 to 1b3uA SCOP code=a.118.1.2	TM-score=0.617 to 1m8xA SCOP code=a.118.1.8	TM-score=0.742 to 1xm9A SCOP code=a.118.1.24	TM-score=0.400 to 1ysmA SCOP code=a.2.16.1