Template-based Modeling Results for YEBB_ECOLI

Submitted Primary Sequence

>Length 200
MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
55431213132000000012121101012013120100000002222100002032322221202201331333200011023212341122002101330422120113231220000200020013012131121120131212113232200121012202233420001112423101100122132222322324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
1	MUSTER	2if6A	0.264	0.910	3.089	threading_1	------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKK-PYVFEA-VGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERY-GKNIPLEETVVSPQAVFDAPQLTTVAKEWPLF---------
2	SPARKS	2if6a	0.269	0.910	4.660	threading_2	------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNK-KPYVFEAVGP-VKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQ-AKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLF---------
3	PROSPECT2	2if6A	0.258	0.910	3.344	threading_3	WQ------PQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFE--AVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQA-KLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEW---------PLF
4	PPA-I	2if6A	0.253	0.910	5.431	threading_4	------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFEA--VGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERY-GKNIPLEETVVSPQAVFDAPQLTTVAKEWPLF---------
5	HHPRED-l	2if6_A	0.260	0.905	8.147	threading_5	------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKK-PYVFEAVG-PVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKE-RYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPF----------
6	HHPRED-g	2if6_A	0.260	0.905	6.825	threading_6	------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPY-VFEAV-GPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLK-ERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWLF----------
7	SP3	2if6a	0.275	0.910	4.426	threading_7	------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNK-KPYVFEAVGP-VKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQ-AKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAK---EWPLF------
8	SAM-T99	2if6A	0.274	0.895	8.102	threading_8	------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRN-KKPYVFEAVGP-VKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQA-KLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEW------------
9	MUSTER	3kw0B	0.206	0.775	1.075	threading_9	IKINLINVLKTGDIFLCSGNYLVSKLIKKVSES-FSHTGIIVKW-GEHTLIESVEDDGVRIVPLEHYIKNYENSSLFIARHELLQNRNLIKVGFSLLNSGYDKNEGIGRHEDNNEYICSEFVNECFKKI-GVEFL--------------TDSFIF----------------PEHIAADHHVLPIAQ--IE----------
10	SPARKS	3kw0a	0.211	0.760	1.285	threading_10	KYENLINVLKTGDIFLCSGNYLVSKLIKKVSES-FSHTGIIVKW-GEHTLIESVEDDGVRIVPLEHYIKNYENSNLFIARLQNVNDDSEIRNLIKVGFSLLNSGYDIGRHEDNNEYICSEFVNECFKK-IGVEF---------------------------------LFIFPEHIAADHHVLPIAQIE------------

Predicted Tertiary Structure


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TM-score=0.952 to 2if6A SCOP code=d.3.1.21	TM-score=0.951 to 2if6A SCOP code=d.3.1.21	TM-score=0.951 to 2if6A SCOP code=d.3.1.21	TM-score=0.947 to 2if6A SCOP code=d.3.1.21	TM-score=0.949 to 2if6A SCOP code=d.3.1.21