Template-based Modeling Results for YEAM_ECOLI

Submitted Primary Sequence

>Length 273
MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCEEEEECCCEEEEECCCCEEEEEECCCEEEEEEEECHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ
542322121221221321100000100133121210203100000012000101033010001121000010102000101320100000011200212220000200200120011003222233232102100200011023123332212222231011002101411222010020022021022100210042121002200210001001201342220220023011311100010014012200120132022213322433384
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ
1	MUSTER	3gbgA	0.098	0.894	1.789	threading_1	---------------KKSFQTNVYRMSKFDYIFNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTSLINVSVITISDSFIRSNKDLLLWNCEHNDIAVLSEVVNGFREINSDEFLKVFFSGFFSKVEK--KYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
2	SPARKS	3gbga	0.103	0.890	3.069	threading_2	----------------KKSFQTNVYRMSKFDIFNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFILGNKDLLLWNCEHNDIAVLSEVVNGFREINYS--DEFLKVFFSGFFSKVEKKYNSIFITDDDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
3	PROSPECT2	3gbgA	0.107	0.894	3.059	threading_3	---------------KKSFQTNVYRMSKFDTYINNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRILGNKDLLLWHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKV--EKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKEL-ESRGVKFRELINSIRISYSISLMKTGFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
4	PPA-I	3gbgA	0.106	0.901	2.113	threading_4	--------------KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD-AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
5	HHPRED-l	3gbg_A	0.100	0.883	3.690	threading_5	---KK-------------SF-QTNVYRMSKFDTYNLYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKKDLLWNCEHNDIAVLSEVVNGFREINSDEFLKVFFSGFFSKVEKKYNS--IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
6	HHPRED-g	3gbg_A	0.100	0.883	3.170	threading_6	----------------KKSFQTNVYR-MSKFDTYILYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIYILGKLLLWNCEHNDIAVLSEVVNGFREINSDEFLKVFFSGFFSKVEKKYNSI--FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKEL-ESRGVKFRELINSIRISYSISLMKTGEKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
7	SP3	3gbga	0.102	0.897	2.817	threading_7	----------------KKSFQTNVYRMSKFDIFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLINVSVITISDSFIRILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
8	SAM-T99	3oioA	0.192	0.381	2.208	threading_8	-------------------------------------------------------------------------------------------------------------------------------GSQPKLTEAVSLE----------------------------ANIEEPLSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQSKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQR--------------
9	MUSTER	1d5yA1	0.195	0.432	0.926	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPRLGE
10	SPARKS	1bl0a	0.183	0.421	1.955	threading_10	-----------------------------------------------------------------------------------------------------------------------------------------------------------DAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKENEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPL---

Predicted Tertiary Structure


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TM-score=0.478 to 1d5yA SCOP code=a.4.1.8	TM-score=0.476 to 1xjaC SCOP code=b.82.4.1	TM-score=0.475 to 1d5yA SCOP code=a.4.1.8	TM-score=0.479 to 1d5yA SCOP code=a.4.1.8	TM-score=0.477 to 1xjaC SCOP code=b.82.4.1