Template-based Modeling Results for YEAJ_ECOLI


  Submitted Primary Sequence

>Length 496
MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCHHHCCCCCCCHHHHCCCCCCCEEECCEEECCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
5521121121000000000000000000011121011003100210101101121012100110031021332422232121002003211321001021231101200011123303210300100100021031232012101001203310000000242100001203020001211201220221122321332120100011102234232100001010112231200000002221022002232220012112110232422110001223321010000011122102000000001000000100000000000002102111311210122221120110101110121022102202342210000000022032010100020001001100200341024110001011110000013022310120022013103312331200000000103333202100200030012023353344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
1MUSTER2v0nA0.1960.8631.615threading_1------------SARILVVDDIEANVRLLE--AKLTAE--YEVSTADGPTALAMAARDLPDIILL--VMMPGMD-----GFTVCRKLKDDPTTRHI------------VVLITALDGRGDRIQGLESGASD--LTKPIDDVMLFARVRSLTRFKLVIDELRQREASGR-RMGVIAGAAARLDGLGGRVLIVDAQRVAAELEHRPVIES-----DPEKAKISAGGPV-------DLVIVNAAAKNF-------DGLRFTAALRS-EERTRQLPVLAMVDPDDRG----RMVKALEIGVNDILSRPI------DPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAV
2SPARKS3i5aa0.1910.6114.244threading_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAMVLLVDDQA--------MIGEAVRRGLAGHESIDFHFCADPHQ------AIAQAVQIKPT-VILQDLV-------MPGLDGLTLVREYRSNPLTRDIPIIVLSTKEDPLIKSAAFAADYLVKLPDNIELVARIRYHSRSYMTLLQRDEAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRATRDQAQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHSLTVSIGVATVQVGQHSRQLILDADKGLYLAKNNGRNQV
3PROSPECT21w25A0.1900.7843.217threading_3IEANVRLLEAKLTPTALAMAARFTVCRKLKDDPTTRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRF------KLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDN--------------------ERQAQRVAAELGVEHRPVIE--------------------------------SDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMV-----------DPDDRGRMVKALE------IGVNDILSRPID--------------------------------PQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPEMLNVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAH
4PPA-I2v0nA0.1820.8512.714threading_4IEANVRLLEAKLTAEVSTAMDGPTALAMAARDLPDIILLDVMMPGMD---------GFTVCRKLKDDPTTRHIPVALDGRGDRIQGLES-----GAS-----------DFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGA-----------------------------------------AARLDGLGGRVL--IVDDNERQAQRVAAEL------GVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAV
5HHPRED-l1w25_A0.1990.7805.976threading_5------------SAR-----------ILVVDD---------------I-----EANVRLLEAKLTAYYEVS-TAMDGPTALAMAAR-----DLPDIILLDVMMPGMDGF---------TVCRKLKDDPALDGRGDRIQG-LESG---------ASDFLTK---------PIDDVMLFARVRSLTRFKLV---IDELRQSLGGRVLIVDDNERELGVEH-R----PVIESDPPVDLVIVNAAALRFTAALRSEER---TR----------QLPVLAMVDPDDRGRMVKALEIGVND-ILSR-PIDPQELS--------ARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSREMLNVTISIGVSATAEGDTPEALLKRADEGVYQAKASGRNA-
6HHPRED-g1w25_A0.1830.8596.123threading_6------------------------------SA-----------------RILVVDDIEANVRLLEAKLTAYYEAMDGPTALAMAAR-----DLPDIILLDVMMPGMDGF-----TVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASD------------FLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARDGLGGRVLIVDDNERQAQRVAAELGVEIESDPEKAKI-SAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTLNVTISIGVSATAEGDTPEALLKRADEGVYQAKASGRNAV
7SP33i5aa0.2250.6174.081threading_7---------------------SAMV--LLVDD------------------------QAMIGEAVRRGLA----------GHESIDFHFCADPHQAIAQAVQIKPTV--ILQDLVMPGLDGLTLVREYRS-------------------------------------------------------------------------------------------------NPLTRDIPIIVLST----------KEDPLIKSAAFAAGAND---------------------YLVKLPDNIEL---VARIRYHSRSYMTLLQRDEAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRATRDQAQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHSLTVSIGVATVQVGQHSRQLILDADKGLYLAKNNGRNQV
8SAM-T992v0nA0.2010.5404.609threading_8------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLGGRVLIVDDNERQAQRSAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFGLNVTISIGVSATAGEGTPEALLKRADEGVYQAKASGVGKA
9MUSTER3breB0.2180.6111.291threading_9---------------------------------------------------------------------APLDGAQAMIGEAVRRSLASE---AGI------------DFHFCSD----------------------------------PQQAVAVANQIKPT-VILQDLVMPG-------------------------VDGLTLLAAYRGNPATRD------IP---------IIVLS----------TKEEPTVKSAAFAA-------GANDYLVKLPD------------AIELVARIR-----YHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDLTVSIGVSTLVPGQTFRVLIEMADQALYQAKNNGRNQV
10SPARKS3brea0.1890.6094.178threading_10---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVMVLLVDDQA--------MIGEAVRRSLASEAGI--DFHFCSDPQQAVAVA----NQIKPTVILQPGVDGLTLLAAYRGNPA---TRDIPIIVLSTKEEPTVKSAAFAAGANDYLV------KLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHHLTVSIGVSTLVGGQTFRVLIEMADQALYQAKNNGRNQV

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.780 to 2v0nA
SCOP code=c.23.1.1
TM-score=0.794 to 2v0nA
SCOP code=c.23.1.1
TM-score=0.572 to 2v0nA
SCOP code=c.23.1.1
TM-score=0.604 to 2v0nA
SCOP code=c.23.1.1
TM-score=0.737 to 2v0nA
SCOP code=c.23.1.1