Template-based Modeling Results for YEAI_ECOLI

Submitted Primary Sequence

>Length 491
MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI
CCCCEEEEHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI
55422201000002000101302212110101213222100000001121220201000000000000000011012321102001311110000000000000000000210011110000000000000000001100002311201211202111000000001000000000000010222112334432000000000000000002001111230101002101322212111100100000000000010011101110000000000000000000010132222010001001000100000100120121122012112212012010111012001210132233200000000210220102100200020010002002410233100010211000000130322102200220031033020213423121100000000102332420210011004001202242231000111
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI
1	MUSTER	2v0nA	0.199	0.872	1.599	threading_1	---SARILVEANVRLLEAKLT-AEYYEVSTA----MDGPTALAMAARDL--------PDIILLDVMM-GFTVCRKLKDDPTTRHIP-----VLITALDGRGDRIQGLESSDFLTDDVMLFARVRSLTRFKLVIDELRQREASGRGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELG-------------EHRPVIES------DPEKAKISAGG--PVDLVIVNAAAKNFD---GLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVN-----------------DILSRPQELSARVKTQIQRKRYTDYLRNNLDHSAVTDQLTGLHNRRYMTGQLDSLVKRATLDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA
2	SPARKS	3brea	0.202	0.635	4.346	threading_2	---------------------------------------------------------------------------------------------------------------------------------AVMVLLVMIGEAVRRSLASEAGIDFHFSDPQ-------------QAVAVANQIKPTV---------ILQDLVMPGVDGLTLLAAYRGNPATRDIPII-VLSTKEEPTVKSAAFA----------------AGANDYLVKLPDAIELVARIRYHSRSYI-----------ALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQ
3	PROSPECT2	1w25A	0.171	0.880	3.454	threading_3	SARDIEANVRLLEAKLTA-----EYYEVSTAMDG----PTALAMAARDLPD------IILLDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGL-----ESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGVLIVDDNERQAQRVAAEL--------------GVEHRPVIESDPEKAKISAG--------GPVDLVIVNAAAKNFD-----------------GLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNNSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA
4	PPA-I	2v0nA	0.179	0.900	2.765	threading_4	---SARILVIEANVRLLEAKLTAEYYEVSTA----MDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDD------------------------------------------RGRMVKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA
5	HHPRED-l	1w25_A	0.222	0.798	6.271	threading_5	---SARIANVRLLEAKL----------------------------TAEYYEVSTAMDG-----PTALAMA--AR--DLPDIILLMPGMDGFTVCRKLKDDPHIPVV-----LITALDGRGDRIQGLE-SGASD-------FLTKPIDDVMGRVLIVDDN-E----RQAQRVA----AELGV-----------EHRPVIE------SDPEKAKISAG--GPVDLVIVNAAAKNFD---GLRFTAA---LRSEERTRQLPVLAMVDPDDRGRMVKA-------L-EIGVNDILSR---PIDPQELSARVKTQIQRKRYTDYLLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKA-
6	HHPRED-g	1w25_A	0.232	0.798	5.832	threading_6	---SARILNVRLLEAKLRKLKDDPTRHVVLITA-LDGRGDRIQGLESGASDFL-TKPIDDV--------------------------MLFARV----------RSLTR-FKLVIDELRQ-----REA----SGRRMGVIAGAAARLDGLGGRVLIVDDN-E----RQAQRV----AAELGVEHRPVIESD-----------------PEKAKISAGGP--VDLVIVNAAAKNF----DG------------LRFTAALRSEERTRQLPVLAMVDPDDRGRMVKAL----EIGVNDILSRPIDPQELSARVKTQIQYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA
7	SP3	1w25a	0.185	0.892	4.114	threading_7	---SARILVANVRLLEAKLTA----EYYEVS--TAMDGPTALAMAARDLPD------IILLDVMMGMDGFTVCRKLKDDPTTRHIP----VVLITALDGRGDRIQGLESSDFLTDDVMLFARVRSLTRFKLVIDELRQRSGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAEL------------GVEHRPVI--------ESDPEKAKISAGGPVDLVIVNAAAKNFD--------------GLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA
8	SAM-T99	2v0nA	0.222	0.587	4.894	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMA--------------------ARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGL----ESGASDFLTKPIDDVMLFARVRSLT-RFKLVIDELRELAVTDQLTGLHNRRYMTGQLDSLVKRLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVV----
9	MUSTER	3breB	0.194	0.642	1.389	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------APLDGAVMVLLVDDQAMIGEAVRRSL-IDFHFCSDPQQAVAVANQIK---TVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPT----VKSAAFAA-------ANDYLVKLPD------AIELVARIRYHSRSYIA------------LQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQ
10	SPARKS	3i5aa	0.193	0.633	4.267	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------SAMVLLVDDQAMIGEAVRRGLAGHSIDFHFCADPHQ----AIAQAVQIKPTVI--LQDLVMPGLDLTLVREYRSNPLTRD----IPIIVLSTKPLIKSAAFAAGANDYLVKLPDNIELVARIRYHSRSYM-----------TLLQRDEAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRATRDQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHIAPVPGSSLTVSIGVATVPQVGQHSRQLILDADKGLYLAKNNGRNQVAAG--

Predicted Tertiary Structure


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TM-score=0.705 to 2v0nA SCOP code=c.23.1.1	TM-score=0.841 to 2v0nA SCOP code=c.23.1.1	TM-score=0.591 to 2v0nA SCOP code=c.23.1.1	TM-score=0.633 to 2v0nA SCOP code=c.23.1.1	TM-score=0.643 to 2v0nA SCOP code=c.23.1.1