Template-based Modeling Results for YEAG_ECOLI

Submitted Primary Sequence

>Length 644
MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHCCCCCCEEEECCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS
1	MUSTER	2j69A	0.143	0.877	0.939	threading_1	-----------------QVRFIQDLERVAQVRSEMSVCLNKLAETI-------------------NKAELAGDSSSGKLSLERDIEDITIASKNLQQ----GVFRLLVLGDMKRGKSTFLNALINLLPSDVLTVLRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYTID---------PAEAKKLEQEKKQADVDYAVVEYPLTLLQKGIEIVDPGEARNELSLGYVNNCHRRYLENYKGRGLTVFFL---VNAWDQ--VRESLIDPDDVEELQASENRLRQAEYCTVEGQNIYDERVFEL--SSIQALRRRLKNPQADLDGTGF----------PKFMDSLNTFLTRERAIAELRQVRTLARLACNHTREA-------VARRIPLLEQDVNELKKRDSVEPEFNKLTGIRDEQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQPELNLFDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDAAFKELSRSASQYGASYNQITDGKDVEEDNSGLLSAGFDWKNILLNYFTVIGIGQADQARRELVKTAKKELVKHLPQQVVYNAVKECFDSYEREVSKRINDDIVSRKINRESEFNRLKNLQEDVIAQLQK--IEAAYSNLLAYYSHH----
2	SPARKS	1g8pa	0.175	0.489	2.028	threading_2	---------------------------------------------------------------------RPVFPFSAIVGQEDMKLALLLTAVDPGIGG------VLVFGDRGTGKSTAVRALAALL---PEIEA---VEGCPVSSPNVEMIPD-------------WATVLST-----------------------NVIRKPTPVVDL-------PLGVSEDRVVGALDIERAISKGEKAFE----PGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGVVERDGLSIRHPARFVLVGSGNPEE------GDLRPQLLDRFLSVEVLSPRDVETRVEVIRRRDTYDADPKAEWRPKDMDIRNQILEARERLP----------------KVEAPNTALYDCAALCIALGSD----GLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	1qgra	0.095	0.994	1.958	threading_3	MELITILEKERAAVENLPTFLVELSRVLANSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARRLGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMTLEAIGYICQDIDIIQGMRKEEPSNTKANFDKESERHFIMQVVCEATQCPDTRVRVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLL-ATCCEDDIVPHVLPFIKEHIKNPDWRILEGPEPSQLKPLVIQELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGV-QEDALMAVSTLVEVLGGEFLKYMEAQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLENLGNENVHRSVKPQILSVFGDIALAIG-GEFKKYLEVVLNTLQQ-ASQAQVDKSDYDMVDYLNELREQPRVEFILSFIDHIAGDEDHTDGARPMIHELLTEGRRSKTNKTLARWATKELRKLKNQA
4	PPA-I	1fnnA	0.092	0.573	1.678	threading_4	-------------------------------------------------------------AIVVDDVFSPSYVPKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARF--------VYINGFIYRNFTAIIGEIARSLNIPFP----------------------------------------------RRGLSRDEFLALLVEHLRERDLY-----------------MFLVLDDAFNLAPDILSTFIRLGQEADKLGAFR-------IALVIVGHNDAVLNNLDPSTRGIMGKYVIRF---SPYTKDQIFDILLDRAKAGLAEGS-YSEDILQMIADITGAQTPLDTNRGDARLAIDIQQNGRKHIAPEDVRKSSKEVLFGISEEVLIGLPLHEKLFLLAIVRSLKIHTPYITFGDAEESYKIVCEEYGERPRVHSQLWSYLNDLREKGIVETRQNTTLISIGTEPLDTLEAVITKLIKEELR------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	1g8p_A	0.161	0.491	2.009	threading_5	--------------------------------------------------------------------RPVFP-FSAIVGQEDM----KLALLLTAVD--PGIGGVLVFGDRGTGKSTAVRALAALLPEIEA------VEGCPVSSPNVEMIPDWA----------------TVLST------------NV---IR-----K---PTPVVD----LPLGVSEDRVVGALDIERAISKGEKAF---EP-GLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVEGLSIRHPARFVLVGSGNPEEG------DLRPQLLDRFLSVEVLSPRDVETRVEVIRRRDTYD------ADPKAFLEEWRPKDMDIRN-----QILEARERLPKVEAPNT--ALYDCAALCIA------LGSDGLRGELTLSARALAALEGATAVGRDHLKRVATMALSH-RLR-------------------VARTVEETLP-----------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	3k1j_A	0.173	0.719	1.128	threading_6	----------------------------------------------GESLELGIEFTTT-----EEIEVPEK-LIDQVIGQEHAVEVIKTAANQ---K-----RHVLLIGEPGTGKSMLGQAMAELLPTDILVFPN----PEDENMPRIKTVPACQGRRI-VEKYREKAK---SQESV-------------LVPK---LLVDNCGR---TKAPFIDATGAHAGALLGDVRHDPF--LGTPAHE-RVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQTEPVPCDFVLVAAGNLDTVDKM-----HPALRSRIYEVYMRTTMPDTIENRKLVQFVAQEVKRDGKIPHFTKEAVEEIVR-----------------------------------EAQKRAG-RKGHLTLRLRDLGGIVRAAGDIAKGKKYVEREDVIEAVKM---AKPLEKQLADWYIERKKEYQVIIGEQKEAVQNVSAIIKRYK--GEDISDIHVQFLQT-------YEGVEGDAASISVATAVISGIPIRQDVALPIGGATPAIEAAIEAKSNDVFEKIQIFPVETIDEVLEI-ALEESRELLRRIRETLPLSL-------------------------------------
7	SP3	1g8pa	0.179	0.494	1.645	threading_7	---------------------------------------------------------------------RPVFPFSAIVGQEDMKLALLLTAVDPGIGG------VLVFGDRGTGKSTAVRALAALL---PEIEA--------VEGCPVSSPNVEM--------IPDWATVLST-----------------------NVIRKPTPVVDL-------PLGVSEDRVVGALDIERAISKGEKAFE----PGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGVVERDGLSIRHPARFVLVGSGNPEE------GDLRPQLLDRFLSVEVLSPRDVETRVEVIRRRDT---YDADPKAFLEEWRPKDMDIRNQI-------LEARERL---PKVEAPNTALYDCAALCIALGSD----GLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	3m6aA	0.148	0.523	5.566	threading_8	ALKELNRYEKIPSSSAESSVIRNYIDWLVALPW------------------------TDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLRKFVRISLGG----------------------------------------RIIQGMKK------------------------------------------------------------------AGKLNPVFLLDEIDKMS-----AMLEVLDEQNSSFSDHYIEETFDVLFIATANNLA-------TIPGPLRDRMEIINIAGYTE-IEKLEIVKD----------HLLPKQIKE-------------------------HGLKKSNLQLRDQAILDIIRYYTREAGVRSLE-RQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKGKLGDVMRESAQAAFSYVRS--------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1b3uA	0.116	0.818	0.900	threading_9	IKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFT---TLVGGPEYVHC--LLP--PLESLATVEE----TVVRDKAVESLRAISHEHSPSD------------EAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLAS----------DEQDS-VRLLAVEACVNIAQLLPQEDLEALVMP-TLRQA-YMVADFTELQKAKTDLVPAFQNLMKDCEAE-----------VRAAASHKVKEFCENLSADCRENVI-------------MSQILPCIKELVSDAN-------QHVKSALASIMGLSPILGKDNTHLLPLFLAQLKDECPERLNIISNLDCVNEVIGIRQ------SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVYAIREAATSNLKKLVEKF----KEWAHATIIPKVLAMSGD---------------PNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMA----------DPVANVRFNVAKSLQKIGPIL---------DNSTLQSEVKPILEKLTQ----DVDVKYFAQEALTVL--S
10	SPARKS	3k1ja	0.168	0.775	1.688	threading_10	------------------------------------------------GESLELGIE-----FTTTEEIEVPEKIDQVIGQ----EHAVEVIKTAAN----QKRHVLLIGEPGTGKSMLGQAMAELLPTETLEDILVFPNPEDENMPRIKTVPACQGRRIVEKYREKAKSQESVLVPKLLVD-----NCGRTKAPFID------------------ATGAHAGALLGDV-----RHDPFLGTPAHERPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMVPCDFVLVAAGNLDTVDK-----MHPALRSRIRGYGYTTMPDTIENRRKLVQFVAQRDGKIPHFTKEAVEEIVREAQRAGRKGHLTLRLGGIVRAAGDIAVKKGKKEREDVIEAVKMAKPLE------KQLADWYIERKKEYQVIKTEGSEIGIVLPIEAVVAPAASKGEIAKEAVQNVSAIIKRYKGEDISRDIHVQFLQTYEGSISVATAVISALEGIPI-RQDVA--MTGEVLPIGGATPAIEAAIE-AGIKMPKSNEKDVF---LSKDKAEK---------------IQIFPVETIDEVLEIAL-------EESEKKRELLRRIRET--LPLSL--------------

Predicted Tertiary Structure


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TM-score=0.432 to 2r2vA SCOP code=h.1.3.1	TM-score=0.476 to 1mozA SCOP code=c.37.1.8	TM-score=0.710 to 1g8pA SCOP code=c.37.1.20	TM-score=0.652 to 1qgkA SCOP code=a.118.1.1	TM-score=0.722 to 1fnnA SCOP code=a.4.5.11