Template-based Modeling Results for YDJN_ECOLI

Submitted Primary Sequence

>Length 463
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHH
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHH
4402100000000000001011333322101100000000000000011011222300310020021002000200000000000000000004032022003001100001100000000000001100112131113111321321111121113123220120012000310011012132221000000000000000302433223023012002101200020020001000000000002001202130013001000000000000000000000011100020022002000000101011100111020114412023300000000000001100000000000000010010220201100000000000110111010000000000011120112100000001000100100010000000000002125312221023333242245
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHH
1	MUSTER	3kbcA	0.285	0.864	3.538	threading_1	----------------------KYIEYPVLQKILIGLILGAIVGLILGHYGYA-----HAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVG----------GQQFQPHQAPPLVHILLDIVPTNPFGALAN---GQVLPTIFFAIILGIAITYLMEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEM-GISEGIYSFTLPLGATINMDG-TALYQGVATFFIANALGS-HLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
2	SPARKS	1xfha	0.292	0.851	5.490	threading_2	----------------------------VLQKILIGLILGAIVGLILGHYGY-----AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQ----------PHQAPPLVHILLDIVPTNPFGALAN---GQVLPTIFFAIILGIAITYLMNSERKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAK-EMGISEGIYSFTLPLGATINMDG-TALYQGVCTFFIANALGS-HLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
3	PROSPECT2	1xfhA	0.294	0.851	4.171	threading_3	V----------------------------LQKILIGLILGAIVGLILGHYGY-----AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQ----------PHQAPPLVHILLDIVPTNPFGALANGQV---LPTIFFAIILGIAITYLNEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRV-AKEMGISEGIYSFTLPLGATINMDGTA-LYQGVCTFFIANALGSH-LTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
4	PPA-I	3kbcA	0.285	0.864	8.193	threading_4	----------------------KYIEYPVLQKILIGLILGAIVGLILGHYGYAH-----AVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQ----------PHQAPPLVHILLDIVPTNPFGALAN---GQVLPTIFFAIILGIAITYLMNSERKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEM-GISEGIYSFTLPLGATINMDG-TALYQGVATFFIANALGS-HLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
5	HHPRED-l	2nwl_A	0.299	0.844	13.213	threading_5	--------------------------YPVLIKILIGLILGAIVGLILGHYGY-----AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASIS-PARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQ-Q---------F-----PPLVHILLDIVPTNPFGALAN---GQVLPTIFFAIILGIAITYLMNKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQLLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKE-MGISEGIYSFTLPLGATINMDGTA-LYQGVCTFFIANALGSH-LTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
6	HHPRED-g	2nwl_A	0.303	0.842	11.508	threading_6	--------------------------YPVLIKILIGLILGAIVGLILGHY-G-----YAHAHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASIS-PARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG-QQ---F-----------PPLVHILLDIVPTNPFGALANGQ---VLPTIFFAIILGIAITYLMNSNRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQLLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRV-AKEMGISEGIYSFTLPLGATINMDGTA-LYQGVCTFFIANALGSH-LTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
7	SP3	1xfha	0.292	0.851	1.514	threading_7	----------------------------VLQKILIGLILGAIVGLILGHYGY-----AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQ----------PHQAPPLVHILLDIVPTNPFGALAN---GQVLPTIFFAIILGIAITYLMNSERKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQLLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKE-MGISEGIYSFTLPLGATINMDG-TALYQGVCTFFIANALGSH-LTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
8	SAM-T99	3kbcA	0.282	0.864	11.100	threading_8	----------------------KYIEYPVLQKILIGLILGAIVGLILGHYGYAH-----AVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASI-SPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAV----------GGQQFQPHQAPPLVHILLDIVPTNPFGALA---NGQVLPTIFFAIILGIAITYLMNSENKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKE-MGISEGIYSFTLPLGATINMDGTA-LYQGVATFFIANALGSHL-TVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------
9	MUSTER	3gi9C	0.104	0.890	0.854	threading_9	MELSMAVGVMIGASIFSIFGVGAKIAGRLPETFILSGIYALLVAYSYTKLIVSNAGPIAFIHKAIDNIITGALSILLWMSYVISIALFAKGF-----AGYFLPLIAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIH-PSYVIPDLAPSAVSGMIFA-----SAIFFLS-YMGFGVITNA---SEHIE--------PKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKAS----ENALAVAAKPFLGNLGFLLI--SIGALFSISSAMNATIYG-------GANVAYSLAKD-GLPE-FFERKVWFKST------GLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSH-EVGGRKEIVIFSFIVVLGV-FLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKTFSNNMYVKSLES-----
10	SPARKS	1ee4a	0.099	0.829	0.775	threading_10	M-TQQLMQEQLSATVKFRQILSREHRPPIDVVIQAG-----VVPRLVEFMRENPEMLQLEAAWALTNIASG----------------------TSAQTKVVVDAD---------------AVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNATWTLSNRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV---RIPKRLVELLSHESTLVQTPALRAVGNIVDLQTQVVINAGVLPALRLLK-----ENIKKEACWTISNITAGN--TEQIQAVIDA-NLIPPLVKLL--------EVAEDKTKKEACWAISNASSGGLQRP-------DIIRYLVSQG-------CIKPLCDLLEIAD-NRIIEVTLDALENILKMGEADKEARGNENADFIEK--AGGMEKIFCQQNENDKIYEK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.438 to 1lrzA SCOP code=a.2.7.4	TM-score=0.438 to 1lrzA SCOP code=a.2.7.4	TM-score=0.458 to 1kd9A SCOP code=h.1.3.1	TM-score=0.442 to 1fioA SCOP code=a.47.2.1	TM-score=0.436 to 1lrzA SCOP code=a.2.7.4