Template-based Modeling Results for YDJL_ECOLI

Submitted Primary Sequence

>Length 358
MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFDE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFDE
CEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHCCCCEEEEECCCCCCCCCCCEEEECHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHEEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFDE
2101021242231020120321213321000102000000000120213201230100211100000010044143132011000211111111011033112100221100001112111000100001031022332000201420211100001000000200022041221120000000000000010031120110000002331221020033010100011323202110221125320000010010220022002002320100000002430301011001211101000012111031002002211030320000101021023002102443101000213367
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFDE
1	MUSTER	2ejvA	0.308	0.944	3.195	threading_1	MRALAKLAPE-EGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLE-SHIVCHACPACRTGNYHVCLNTQILGV---DRDGGFAEYVVVPAE-------NAWVNPKDLPFEVAAILEPFGNAVHTVYA-GSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN---PYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELMRGITAFGIAGRRWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPKA--
2	SPARKS	3m6ia	0.234	0.944	3.993	threading_2	TNIGVFTNP-QHDLWISEASPEELKEGEVTVAVRSTGICGSDVHFWKHGCIGVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIE-PQVICNACEPCLTGRYNGCERVDFLST--PPVPGLLRRYVNHPAVW-------CHKIG-NMSYENGAMLEPLSVALAGLQRA-GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDID---EGRLKFAKEICPEVVTHKVEEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRY-CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPGAIKVQIQSL---
3	PROSPECT2	3m6iA	0.237	0.944	4.821	threading_3	TNIGVFT-NPQHDLWISEASPEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIE-PQVICNACEPCLTGRYNGCERVDFLS--TPPVPGLLRRYVNHPAVW-------CHKIG-NMSYENGAMLEPLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDE---GRLKFAKEICPEVVTHKVERLSAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYC-NTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPGAIKVQIQS---L
4	PPA-I	1pl7A	0.267	0.953	3.694	threading_4	NLSLVVHGP--GDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIE-PGAPRENDEFCKMGRYNLSPSIFFCA--TPPDDGNLCRFYKHNA-------AFCYKLPDNVTFEEGALIEPLSVGIHACRRG-GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS---ATRLSKAKEIGADLVLQISKESPQEIARKVEGGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSD
5	HHPRED-l	2d8a_A	0.299	0.888	2.211	threading_5	-VAI-KTKPGY-GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWRIKPPQI-GHEVAGEVVEIGPGVEGIEVGDYVSVE-THIVCGKCY------------TKIFG---VDTDGVFAEYAVVPAQ-------NIWKNPKSIPPEYATLQEPLGNAVDTVL--AGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVINPFEEDVVKEV-DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNLIIFKALTIYGITGRHWETWYTVSRLLQSGKLNLDPIITHKYKFDKYEEAFEL-RAGKTGKVVF------
6	HHPRED-g	1pl8_A	0.259	0.958	1.979	threading_6	PNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIE-PGAPRENDEFCKMGRYNLSPSIFFCA--TPPDDGNLCRFYKHNAAFC-------YKLPDNVTFEEGALIEPLSVGIHA-CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSA---TRLSKAKEIGADLVLQISKESPQEIARKVEGGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCN-TWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSD
7	SP3	3m6ia	0.234	0.944	4.164	threading_7	TNIGVFTNP-QHDLWISEASPEELKEGEVTVAVRSTGICGSDVHFWKHGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIE-PQVICNACEPCLTGRYNGCERVDFLST--PPVPGLLRRYVNHPAVW-------CHKIGN-MSYENGAMLEPLSVALAGLQRAG-VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDID---EGRLKFAKEICPEVVTHKVEEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRY-CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPGAIKVQIQSL---
8	SAM-T99	1pl7A	0.261	0.953	3.017	threading_8	NLSLVVHGPG--DLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIE-PGAPRENDEFCKMGRYNLSPSIFFCAT--PPDDGNLCRFYKHNA-------AFCYKLPDNVTFEEGALIEPLSVGIHACRRGG-VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSAT---RLSKAKEIGADLVLQISKESPQEIARKVEGGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYC-NTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSD
9	MUSTER	1pl7A	0.267	0.953	3.157	threading_9	NLSLVVHGP--GDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIE-PGAPRENDEFCKMGRYNLSPSIFFCA--TPPDDGNLCRFYKHNAA-------FCYKLPDNVTFEEGALIEPLSVGIHACRRG-GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS---ATRLSKAKEIGADLVLQISKESPQEIARKVEGGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSD
10	SPARKS	1vj0a	0.227	0.961	3.587	threading_10	AHAMVLEKFN-QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLKPGDLIVWN-RGITCGECYWCKVSKPYLCPNRKVYGINRPHLRGCYSSHIVLD------PETDVLKVSEKDDLDVLAMAMSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS---PNRLKLAEEIGADLTLNRREEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREALKVILYPE---

Predicted Tertiary Structure


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TM-score=0.903 to 1e3jA SCOP code=b.35.1.2	TM-score=0.946 to 1pl7A SCOP code=b.35.1.2	TM-score=0.898 to 1pl7A SCOP code=b.35.1.2	TM-score=0.907 to 1pl7A SCOP code=b.35.1.2	TM-score=0.952 to 1pl7A SCOP code=b.35.1.2