Template-based Modeling Results for YDJI_ECOLI

Submitted Primary Sequence

>Length 278
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
CCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
34030310021024220000000010020010002003414010000002000210213000200110044030000000110211300220031001000010020212200300220020035120001010000133312332222221011310020034020000000001110213221302120022013103010000011202321021003000000000020010002002312322122023302300131012103202032434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
1	MUSTER	1gvfB	0.367	0.971	3.444	threading_1	SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVESA-------FLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAEDPRYYMRVGMDAMKEVVRNKINVCGSANRI-
2	SPARKS	3pm6a	0.319	0.993	5.693	threading_2	LSNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYAD-SLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVTVDLEGVLTTPEESEEFVA-TGINWLAPAFGNVHGNYGPRGQLDYERLQRINEAVGVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKAGSPITRLHEEVTNAMQAAVEKIMDMIDSTGKAE
3	PROSPECT2	3pm6A	0.319	0.993	4.277	threading_3	LSNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYAD-SLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDQDTVDLEGVLTTPEESEEFVA-TGINWLAPAFGNVHGNYGPRGQLDYERLQRINEAVRVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKAGSPITRLHEEVTNAMQAAVEKIMDMIDSTGKAE
4	PPA-I	1gvfB	0.367	0.971	6.116	threading_4	SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVESA-------FLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAEDPRYYMRVGMDAMKEVVRNKINVCGSANRI-
5	HHPRED-l	3n9r_A	0.336	0.964	4.758	threading_5	MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI---------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKGEPKLDFERLQEVKRLTNIPLVLHGASGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDLRKFFSPAQLALKNVVKERMKLLGSANKI-
6	HHPRED-g	3n9r_A	0.336	0.964	4.061	threading_6	MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI---------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKGEPKLDFERLQEVKRLTNIPLVLHGASGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDLRKFFSPAQLALKNVVKERMKLLGSANKI-
7	SP3	3pm6a	0.319	0.993	6.145	threading_7	LSNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADS-LLVRTAASACRAASVPITLHLDHAQDPEIIKRAADPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVTVDLEGVLTTPEESEEFVA-TGINWLAPAFGNVHGNYGPRGQLDYERLQRINEAVGVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKAGSPITRLHEEVTNAMQAAVEKIMDMIDSTGKAE
8	SAM-T99	1gvfB	0.367	0.971	5.431	threading_8	SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVESAFL-------TDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFANDPRYYMRVGMDAMKEVVRNKINVCGSANRI-
9	MUSTER	3q94A	0.415	0.971	3.424	threading_9	PLVS--KELNKALEGKYAVGQFN-NNLEWTQAILAAAEEEKSPVILGVSEGAARHTGFKTVVAVKALIEENITVPVAIHLDHGSSFEKCKEAIDAGFTSVI--ASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAE-GVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAE-EQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLNKDPRKFIGPGRDAIKATVIGKIREFGSNGKA-
10	SPARKS	1gvfa	0.369	0.964	5.418	threading_10	SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGSAF----------LTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAEDPRYYMRVGMDAMKEVVRNKINVCGSANRIS

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.970 to 1gvfB SCOP code=c.1.10.2	TM-score=0.923 to 1gvfB SCOP code=c.1.10.2	TM-score=0.901 to 1gvfB SCOP code=c.1.10.2	TM-score=0.899 to 1gvfB SCOP code=c.1.10.2	TM-score=0.970 to 1gvfB SCOP code=c.1.10.2