Template-based Modeling Results for YDJH_ECOLI


  Submitted Primary Sequence

>Length 315
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
CCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCHHHCCCHHHCCHHHHHCCCEEEEECHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
554210000010000000221231123232121320010110200000000030112000001003120021002103424030310111322300000000144231100001200112012320212202202000000111022210300120021033241100010011211300310120021010010212102101223213200200141202000021052000012232102020022121100000000000000000022330320020000000000112112211311310221133235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
1MUSTER3in1A0.9770.9712.986threading_1--NLDVICIGAAIVDIPLQPVSKNIFDVDSYPLE-RIATTGGDAINEATIISRLGHR-TALSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-IICAD-IKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDT--KVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYE-
2SPARKS3pl2a0.2300.9523.564threading_2-STHEVLAIGRLGVDIYPLQSGVGLAD-----VQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPPDLNIESADVSLDDVREADILWFTLTGFSEEP-SRGTHREILTTRANRRHTIFDLYRPSPEEATKQAEWALQHSTVAVGNKEECEIAVGETEPERAGRALLERGVELAIVKQGPKGVA--TKDETVEVPPFF-VDVINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALVASRLECST-APTTDEVEASLN----
3PROSPECT22v78A0.1970.9654.413threading_3V---DVIALGEPLIQFNS------FNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLASDNAKEAVIKAFELAKSRSLDTNIRPLWSSLEKAKETILSILKKYDVLITDPDDTKILLDVTDPDEAYRKYKELGVKVLLYKLGSKGAIAYKDNVKAFKDAYK-VPVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLEDAERFLNEFK-
4PPA-I3in1A0.9350.9713.606threading_4--NLDVICIGAAIVDIPLQPVSKNI-FDVDSYPLERIATTGGDAINEATIISRLGHR-TALSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ--IICADIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDT--KVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYE-
5HHPRED-l3h49_A1.0000.9522.533threading_5--NLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIA-TTGGDAINEATIISRLGHRTAL-SRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-IICAD-IKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGD---KVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQL------
6HHPRED-g2fv7_A0.2210.9462.164threading_6---AAVVVVGSCMTDLVSL-TSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV-AGANLLLNTEDLRAAANVISRAKVMVCQLEITP---ATSLEALTMARRSGVKT---LFNPAPAIADLD-PQFYTLSDVFCCNESEAEILTGLTVAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPKHIPTEK-VKAVDTTGAGDSFVGALAFYLYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPLTLF----
7SP33pl2a0.2370.9523.611threading_7-STHEVLAIGRLGVDIYPLQSGVGLADVQS-----FGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPPDLNIESADVSLDDVREADILWFTLTGFSEEP-SRGTHREILTTRANRRHTIFDLYRPSPEEATKQAEWALQHSTVAVGNKEECEIAVGETEPERAGRALLERGVELAIVKQGPKGVAT--KDETVEVPPFF-VDVINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALVASRLECST-APTTDEVEASLN----
8SAM-T991rk2B0.2600.9522.996threading_8QNAGSLVVLGSINADHILN-LQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHA-GANAALSPALVEAERIANASAL-----LMQLESPLESVMAAAKIAHQNKTIVALNPA-----PARELPDELLALVDIITPNETEAEKLTGIRDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFR-VQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQ--
9MUSTER3k9eB0.2300.9522.792threading_9LS--KVFTIGEILVEIASKIGQPFDQPGIWNG-----PYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNINAACGKLSAQHVDENILKDCTHFHIGSSLF--SFHVDAVKKAVTIVKANGGVISFDNIRKELDIPRDALHFVLELTD-IYPSEGEVLLLSPHSTPERAIAGFLEEGVKEVIVKRGNQGASYYSANEQFHVESYP-VEEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTRRGPE--GTSRLEIETFIQRH--
10SPARKS3in1a0.9440.9713.414threading_10--NLDVICIGAAIVDIPLQPVS-KNIFDVDSYPLERIATTGGDAINEATIISRLGHRTA-LSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-IICAD-IKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGD--TKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYE-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.869 to 1vm7A
TM-score=0.995 to native
SCOP code=c.72.1.1		 TM-score=0.868 to 1vm7A
TM-score=0.992 to native
SCOP code=c.72.1.1		 TM-score=0.892 to 1wyeA
TM-score=0.852 to native
SCOP code=c.72.1.1		 TM-score=0.943 to 1wyeA
TM-score=0.843 to native
SCOP code=c.72.1.1		 TM-score=0.869 to 1vm7A
TM-score=0.994 to native
SCOP code=c.72.1.1

  Experimental Structure

Download 3in1A
SCOP code=c.72.1.1