Template-based Modeling Results for YDIV_ECOLI

Submitted Primary Sequence

>Length 237
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
CCCHHCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
541213222201000000112441000010001010432223001120011021221020012002002101211232200000001231011112233001103412101010112222123220230010013101000011000000020012011110100210023113232021002000100230111000101222310210231302001000021022320221235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
1	MUSTER	3ii8B	0.199	0.975	3.003	threading_1	LRQALERN-ELVLHYQPIVELSGRIVGGEALVRWEDPERGLV--PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQDLTLSVNISTRQFEGEHLTRAVDRALARSDCLELEITENVLVT--DEVRTCLDALRARVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNLSTPQAADAFASLLDR
2	SPARKS	3u2ea	0.147	0.975	5.154	threading_2	LRGAIGRG-EITPYFQPIVRLTGALSGFEALARWIHPRRGL--PPDEFLPLIEEGLELGAHHAAAQQLSTWRAAHPAGNLTVSVNLSTGEIDRPGLVADVAETLRVNRLLKLEVTESDIR-DPERAAVILKTLRDAGGLALDDFGTGFSSLSYLTRLPFDTLKIDRYFVRTG-NNAGSAKIVRSVVKLGQDLDLEVVAEGVEN-AEAHALQSLGCDYGQGFGYPALSPQEAEVYLNE
3	PROSPECT2	2r6oA	0.195	0.975	2.875	threading_3	LRQALERN-ELVLHYQPIVELSGRIVGGEALVRWEDPERGLVPSA--FIPAAEDTGLIVVLEACCTQLRAWQQQRAADDLTLSVNISTRQFEGEHLTRAVDRALARSGLLELEITEN--VLVTDEVRTCLDALRARVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNLSTPQAADAFASLLDR
4	PPA-I	3s83A	0.140	0.962	3.689	threading_4	LRGAIGRG-EITPYFQPIVRLTGALSGFEALARWIHPRRGL--PPDEFLPLIEEGSELGAHHAAAQQLSTWRAAHPAGNLTVSVNLSTGEIDRPGLVADVAETLRVNGALKLEVTESDIR-DPERAAVILKTLRDAGGLALDDF---FSSLSYLTRLPFDTLKIDRYFVRTG-NNAGSAKIVRSVVKLGQDLDLEVVAEGVEN-AEAHALQSLGCDYGQGFGYPALSPQEAEVYLNE
5	HHPRED-l	2bas_A	0.124	0.954	4.808	threading_5	-LDPLDNIDDVLPYYQAIFSAEQKVVGYEVLGRILADSEIQSLGP-FFLDAGIPEEKLEVDNRIIRQALDRF-LEADSDLLIF-NQDANLL-LDHGELELLKEYEAKHRFVLEITEHNFEGDIEQLYH-LAYYRYGIKIAVDNIGKESSNLDRIALLSPDLLKIDLQALK----SPSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGRYFQGYYLSPSERDVLKQRLK-
6	HHPRED-g	3hvb_A	0.122	0.966	4.340	threading_6	LQQALETN-SFRLLFQPVISLGDSHENYEVLLRLLNPQGQEVPPA-EFLHAAKEAGLAWVILNSIKLLAEHRAKGH--QTKLFVHLSSASLQDPGLLPWLGVALKAARSLVFQISEADATSYLKQAKQLTQGLATLHQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQV-ENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLGPSQAMDYDFS---
7	SP3	3u2ea	0.147	0.975	5.365	threading_7	LRGAIGRG-EITPYFQPIVRLTGALSGFEALARWIHPRRGL--PPDEFLPLIEEGLELGAHHAAAQQLSTWRAAHPAGNLTVSVNLSTGEIDRPGLVADVAETLRVNGALKLEVTESDIR-DPERAAVILKTLRDAGGLALDDFGTGFSSLSYLTRLPFDTLKIDRYFVRTG-NNAGSAKIVRSVVKLGQDLDLEVVAEGVEN-AEAHALQSLGCDYGQGFGYPALSPQEAEVYLNE
8	SAM-T99	3ii8B	0.190	0.979	5.749	threading_8	RLRQALERNELVLHYQPIVELAGRIVGGEALVRWEDPERGL--VPSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQDDLTLSVNISTRQFEGEHLTRAVDRALARSGCLELEITENVLV--TDEVRTCLDALRRGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNLSTPQAADAFASLLDR
9	MUSTER	3s83A	0.140	0.962	2.981	threading_9	LRGAIGRG-EITPYFQPIVRLTGALSGFEALARWIHPRRGL--PPDEFLPLIEEGSELGAHHAAAQQLSTWRAAHPAGNLTVSVNLSTGEIDRPGLVADVAETLRVNGALKLEVTESDIR-DPERAAVILKTLRDAGGLALDDF---FSSLSYLTRLPFDTLKIDRYFVRTG-NNAGSAKIVRSVVKLGQDLDLEVVAEGVEN-AEAHALQSLGCDYGQGFGYPALSPQEAEVYLNE
10	SPARKS	3n3ta	0.195	0.975	5.088	threading_10	LRQALERN-ELVLHYQPIVELSGRIVGGEALVRWEDPERGLV--PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWADDLTLSVNISTRQFEGEHLTRAVDRALARSGLLELEITENVLVT--DEVRTCLDALRARGRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNLSTPQAADAFASLLDR

Predicted Tertiary Structure


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TM-score=0.784 to 2basA SCOP code=c.1.33.1	TM-score=0.762 to 2basA SCOP code=c.1.33.1	TM-score=0.767 to 2basA SCOP code=c.1.33.1	TM-score=0.756 to 2basA SCOP code=c.1.33.1	TM-score=0.751 to 2basA SCOP code=c.1.33.1