Template-based Modeling Results for YDHX_ECOLI

Submitted Primary Sequence

>Length 222
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHCCCEECCHHCCCCCCEEEECCHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
552212210200000000001122122324433211000000124021030002002522312231210000202234333412110012001103201003101120012144000100221020000001001130110232222122010002001432220100100133000004331220211133232220222221302001111332234444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
1	MUSTER	2vpzB	0.376	0.838	4.036	threading_1	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAERDVLRPEQGTRPKLFYLNAPSLTRESEV
2	SPARKS	1kqfb	0.245	0.955	5.413	threading_2	-AMETQDIIKR-------SATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRV-SVGQEPACVKTCPTGAIHFGTKKEELAEQRVAKLHAGVYNPEGVGGTHVMYVLH-HADQPELY
3	PROSPECT2	2vpwB	0.371	0.838	4.740	threading_3	MP---------------------------------RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRERE-VGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCAH-RLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAERDVLRPEQGTRPKLFYLNAPSKKGLTRH
4	PPA-I	2vpzB	0.366	0.838	7.739	threading_4	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAERVDLRPEQGTRPKLFYLNAPSKKGLTRE
5	HHPRED-l	1ti6_B	0.238	0.833	5.134	threading_5	---------------------------------MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEWPRWMNIERR-ERGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQREDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCAH-LLDDEKMPRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKPRVYYKNLYRFEKNYV-
6	HHPRED-g	2ivf_B	0.250	0.847	4.879	threading_6	---------------------------------KRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEHMRVTTYQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKRENGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCYP-RIEKGIANACNRQCPGRVRAFGYLDDTHVHKLVKKWKALPLHAEYGTGPNIYYVPPMGARGFGED
7	SP3	2vpwb	0.371	0.838	4.789	threading_7	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAEVDVLRPEQGTRPKLFYLNAPSKTRESEV
8	SAM-T99	2vpzB	0.394	0.788	6.200	threading_8	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHPA-GYVSKCTFCA-HRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAADVLRPEQGTRPKLFYL-----------
9	MUSTER	1ti4B1	0.235	0.824	3.611	threading_9	---------------------------------MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERRE-RGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQREDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCAHLLDDAPKMPRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKPRVYYKNLYRFEK----
10	SPARKS	2vpwb	0.371	0.838	5.218	threading_10	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAEVDVLRPEQGTRPKLFYLNAPSKKRESEV

Predicted Tertiary Structure


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TM-score=0.773 to 1ti4B SCOP code=b.3.5.1	TM-score=0.781 to 1ti4B SCOP code=b.3.5.1	TM-score=0.831 to 1kqgB SCOP code=d.58.1.5	TM-score=0.772 to 1ti4B SCOP code=b.3.5.1	TM-score=0.770 to 1ti4B SCOP code=b.3.5.1