Template-based Modeling Results for YDHW_ECOLI

Submitted Primary Sequence

>Length 215
MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
54423233222104022123222300311332232223221121002001111321200011201212222233101100320333230210000103431100022000110000011122321010002001321321122130110221112032210210021034123111022021222210000221012010200011121232324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
1	PROSPECT2	3cucA	0.081	0.972	1.007	threading_1	LQPLKPEDLKRWNDKFKLEFNYYGQTKLLLFGETSGNASLKDYEEKAHNVG------LEIKQEAQDKERPLTESFIRELNRTILVQDYWRPNSVLTGESYASPEETPAFTSLVDWYNLEADKGTPVELAALLHYRYIRIHPFEDGNGRIYGYPIVIHSEDKSNYLNILHQVEAGLTPSDGANATLNDILPFVNYLSSCLIRSLTLAIKAKGESIE
2	PROSPECT2	1urhA	0.085	0.935	1.003	threading_2	AEHIDDPEIMASPGQEDRNVAQEDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQD--KHLIVYDEGNLFSAPRAWWMLRTFGDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDELVPWTELVREGELKTTDELDAIFFGRG------------VSYDKPIIVSGSGVTAAVVLLALATLDVPNVKSE
3	MUSTER	1vp5A	0.111	0.921	0.957	threading_3	NGVEMPILGYGVFQIPP-EKTEECVYEAIYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKQLEYIDLYLIHQPFGDVHCAWKAMEEMYKDGLVRAI--GVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKN----------IFQNGVLRSIAEKYG----KTV
4	SPARKS	3nona	0.136	0.823	0.719	threading_4	LASLPDKEPGPVVASSGLVLQATTSFADCPPLGTGVGALMEDPQALAFIRQQAARARYVGAAGLLQGKRATTHWAYHELLAPLGA-IPVHERVVRDGN----LLTGGGITA-GIDFALTLAAELFDAATAQRVQLQLEYAPAPPFNA---GSPDTAPASVVQQARQRAADSLHKRRTLRAAARLAA-----------------------------
5	PROSPECT2	1oyzA	0.107	0.958	0.989	threading_5	YQKRKASKEYGLYNQCKKLND-DELFRLLDDH-----NSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDLNNALNDKSARCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPN---GDVRNWAAFAININKYDNSDIRDCFVELQDKNELKKNTVYDDIIEAAGETSAIDKLKRS
6	PPA-I	2hxoA	0.120	0.777	0.616	threading_6	LATGPGAIYWHITGKAELGAATDAVVTAAVTAGPTGAADSPQDAVRAVALGLWDATTQLATQLSRTPWGTVAPRIFESLGRQVQAGVPEAHWFTAS-----------SALHYILGAAGQNAANDEFLDTVSTAWEGLDPDAYPFTRAVADQVRGHDDREQFLAGITLVLTG-----ITALHRP--------------------------------
7	HHPRED-l	1lva_A	0.201	0.693	0.737	threading_7	--------------------------------------GSPEKILAQIIQEH-REGLDWQ--EAA-TRASLSLEETRKLLQS-AAAG---QVTLLRVENDLYAISTER----YQAWW---------QAVTRALEEFHSRYPLPLARELRSRYFSRLPARVYQALLEEWSREGRLQ------LAANTVALAGFPSFSETQKKLLEDKYRVSRWQP-
8	HHPRED-g	1lva_A	0.220	0.698	0.787	threading_8	--------------------------------------GSPEKILAQIIQEH-REG-L-DWQEAAT-RASLSLEETRKLLQS-AAAG---QVTLLRVENDLYAISTER----YQAWW-----QAVTRALEEFHSR----YPLPLARELRSRYFSRLPARVYQALLEEWSREGRL------QLAANTVALAGFPSFSETQKKLLEDKYRVSRWQPP
9	SP3	2vq2a	0.130	0.963	0.463	threading_9	VSNIKTQLAMEYMRGQDYRQATASIEDALKSP----KNELAWLVRAEIYQYNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAES-MAYFDKALADPTYPTPYIANLNKGICSAK-QGQFGLAEAYLKRSL-AAQPQ-FPPAFKELARTKMLAGQLGDADYYFKKYVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFYSEELQTV
10	SAM-T99	2ysrA	0.200	0.442	0.723	threading_10	-GYRATKLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQ------------LLRKFLKNHVIEDIKGRWGSE---------------------NVDDNNQLF--------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.578 to 2g03A SCOP code=a.265.1.1	TM-score=0.742 to 1urhA SCOP code=c.46.1.2	TM-score=0.784 to 1vp5A SCOP code=c.1.7.1	TM-score=0.784 to 1vp5A SCOP code=c.1.7.1	TM-score=0.501 to 1g2iA SCOP code=c.23.16.2