Template-based Modeling Results for YDHQ_ECOLI

Submitted Primary Sequence

>Length 418
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITDAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITDAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
CCCCEEEEEECCCEEEEECCCEEEEEEECCCEEEEECCCEEECCEEECCCEEEEECCCEEEEEEECCCCEEEEECCCEEEEEEEECCCEEEECCEEEEEEEECCCEEEEECCEECCEEECCCCEEEEECCCEEEEEEEECCCEEEECCEEEEEEEECCCEEEEECCCEEEEEEEECCCEEEECCCCCCEEEECCEEEEECCCCCCEEEECCCEEEECCCEEEEECCCEECCCEEEECCEEEEECCEEEEEEEECCCEEEECCCCCCEEEEECCCEEEEEECCEEEEECCCEEEEEECCCCCCCEEEEECCEEEEEECCCCCCCEEEECCCEEECCCCCEEECCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITDAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
5222220101212110022120100001130200022202022000212020101220102001013402010122010200001211000123101010211311000230101000022201010222120220002231000120100000012202000122020110101211000111312110011010001213222010121211111220010112021221100110201011100110002112010112212221000232100021211010122000000102314312010220000001111121210101111010120101112322220101023031300000000034222000002230301010000122322123213010011232222235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITDAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
1	MUSTER	1dabA	0.147	0.993	1.526	threading_1	GSDPGGVRTASGTTIKVSGRNPAAELQFRNGSVTSSGQLSDDGTVTVKAGKLVADHATLANLYVAGEQAQASIADSTLQGAVQIERGANVTVQRSAIVDGGLHIGALQSLQDLPPSRVVLRDTNVTAVPASGAAAVSVLGASELTLDGGHITGG--RAAGVAAMQGAHLQRATIRRGDALAGGAVPGGAVPGGAVPGGFGPGGFGPVLDGWYGVDVSGSSVELAQSIVEAPIRVGRGARVTVPGGPHGNVIETGGARRFAPQAAPLSITLQAGAHAQGKALVKLTLTGGADAQGDIVASIGPLDVALASQARWTGATRAVDSLSIDNAVGALRLASDGSVDPAEAGRFKVLTVNTLAGSGLFRMNVFADLGLSDKLVVMQDASGQHRLWVRNSGSEPASA-NTLLLVQTPLGSTLANK
2	SPARKS	1daba	0.143	0.986	2.565	threading_2	LENPAAELQFRNGSVTSSGQLSDDGIRRFLGTVTVKAGKVADHATLANDGIALYVAGESIADSTLQGAGGVQIERGANVTVSAIVDGGLHIGALQSLQPEDLPPSRVVLRDTNVTAVPASGAPAAVSVLGA--SELTLD--GGHITGGRAAGVAAMQGAVVHLQRATIRRGDALAGGAVPGGAVPGGAVPGGFGPGGFGPVLDGWYGVDVSGSSVELAQSIVEAPELGAA-IRVGRGARVTVPGGSLSGNVIETGGARRFAPQAAPLSITLQAG-AHAQGKALLYRVLPEPVKLTLTGGIGPLDVALASQVDSLSIDNATWVMTDNSNVGALRLASDGSVDPAEAGRFKVLTVNTLAGSGLFRMNVFADLGLSDKLVVMQDASGQHRLWVRNSGSEPASANTLLLVQTPLGSATFTLA
3	PROSPECT2	1daba	0.128	0.990	2.888	threading_3	GSDPGGVRTASGTTIKVSGRQPAAELQFRNGSVTSSGQLSDDGIRRFLGTVTVKADDDGIALYVAGEQAQASIADSTLQGGVQIERGANVTVQRSAIVDGIGALQSLQPEDLPPSRVVLRDTNVTAVPASGAPAAVSVLGASELTL--DGGHITGGRAAGVAAMQGAVVQRATIRRGDALAGGAVPGGAVPGGAVPGGFGPGGFGPVLDGWYGVDVSGSSVELAQSIVEAPIRVGRGARVTVPGGSLSNVIETGGARRFAPQAAPLSITLQAGAHAQGKAPVKLTLTGGADAQGDIVATELPSDVALASQARWTGATRAV--DSLSIDNATWVMTDNSNVGPAEAGRFKVLTVNTLAGSGLFRMNVFADLGLSDKLVVMQDASGQHRLWVRNSGSEPASANTLLLVQTPLGSAAKAPP
4	PPA-I	1dabA	0.137	0.993	1.631	threading_4	GSDPGGVRTASGTTIKVSGRQFRNGSVTSSGQLSDDGIRRFLGTVTVKAGKLVADHATLANLYVAGEQAQASIADSTLQGGVQIERGANVTVQRSAIVLHIGALQSLQPEDLPPSRVVLRDTNVTAVPASGAPAAVSVLGASELTLDGGHITGG--RAAGVAAMQGAHLQRATIRRGDALAGGAVPGGAVPGGAVPGGFGPGGFGPVLDGWYGVDVSGSSVELAQSIVEAPERVGRGARVTVPGGAPHGNVIETGGARRFAPQAAPLSITLQAGAHAQGKALLYRVLPEPVKLTLTGGATSIGPLDVALASQARWTGATRAVDSLSIDNATWVMTDNSNVGAAEAGRFKVLTVNTLAGSGLFRMNVFADLGLSDKLVVMQDASGQHRLWVRNSGSEPASAN-TLLLVQTPLGSAATFT
5	HHPRED-l	3h09_A	0.136	0.969	5.729	threading_5	VHNPKSDRIGKGTLIVEGKGENKGSLKVGDGTVILKQQAAFSQVGIVSGRSTVVLNDDKVDSIYFFRGGRLDANGNNLTFHIRNIDDGARLVNHNKTSTVTITGESLITPNTITPFRRIKDGGNWLYMGKTSDEAEGKNNGNLNVTKGKSE-------QNRFLLTGGTNLDLKVEK-GTLFLSGRPTRDIAGIENNEVVVEDDWINRNFKATNINVTNATLYSGRNVANITSNITASDNAKVHIGYKDTVCVRSDYTGYVTCTTDKLSDKALNSFNATNVSGNVNLSGNANFVLGKANLFGT--ISGTGNSQVRLTENSHWHLTGDSNVNQLNLDKGHIHLNAQVTTYNTLTVNSLSGNGSFYYLTDLSNKQGDKVVVTKSATGNFTLQVADKTGEPT-K-NELTLFDASNNLNVSL-
6	HHPRED-g	3h09_A	0.146	0.967	1.449	threading_6	NNHGKSVTLRGSGTLTLNN-----NIDQGAGGLFFEGDYEVKSTTSVADGKTVTWKVHNSDRLAKIGKGTLIVEGKGENKGSLKVGDGTVILKQQADSQVGIVSGRSTVVLNDDKNSIYFRGGRLDANGNNLTFEHRNIDDGARLVNHNSKTSTVTITNRFLLTGGTNLNGDLKVEKGTLFLSGRENNEVVVEDDWINRNFKATNINVTNNATLYSGRNVANITSNITASD-----NAKVHIGYKAGDTVCVRSDYTGYVTCTTDKLSDKALNSFNATNVSGNVNLSGNANFVL--GKANLFGTISGTGNSQVRLTENSHWHLTGDSNVNQLNLDKGHIHLNAQVTTYNTLTVNSLSGNGSFYYLTDLSNKQGDKVVVTKSATGNFTLQVADKTGEPT--KNELTLFDASNNLNVSLV
7	SP3	1daba	0.143	0.988	2.788	threading_7	LENPAAELQFRNGSVTSSGQLSDDGIRRFLGTVTVKAGKLVADDTWDDDGIALYVAGESIADSTLQGAGGVQIERGANVTVSAIVDGGLHIGALQSLQPEDLPPSRVVLRDTNVTAVPASGAPAAVSVLGA--SELTLD--GGHITGGRAAGVAAMQGAVVHLQRATIRRGDALAGGAVPGGAVPGGAVPGGFGPGGFGPVLDGWYGVDVSGSSVELAQSIVEAPELGAA-IRVGRGARVTVPGGSLSGNVIETGGARRFAPQAAPLSITLQAGAHAQGKALLYRVLPEPVKLTLTGGSIGPLDVALASQVDSLSIDNATWVMTDNSNVGALRLASDGSVDPAEAGRFKVLTVNTLAGSGLFRMNVFADLGLSDKLVVMQDASGQHRLWVRNSGSEPASANTLLLVQTPLGSATFTLA
8	SAM-T99	3h09B	0.169	0.778	2.776	threading_8	--TLNNNIDQGAGGLFFE-------------------------------GDYEVK--GTSDSTTWK-GAGVSVADGKTVTWAKIG-KGTLIVEGKGENKGSLKVERMNGFNGYFGEEEGKNNGNLNVTFKGKSEQNRFLLTGGTNLNGDLKVTLFLSG-----------NNEVVVEDDWINRNFKATNINVTNNATLYSGRNVANITSNIT-----ASDNAKVHIGYKAGDTVVRSDYTGYV---TCTTDKLSDKALNSFNATNVSGNVNLSGNANFVLGKANLF------------GTISGT-----GNSQVRLTENSHWHLTGDSNVNQLNLDKGHIHLNAQNTTYNTLTVNSLSGNGSFYYLTDLSNKQGDKVVVTKSATGNFTLQVADKTGEPT--------------------
9	MUSTER	2odlA	0.121	0.849	1.302	threading_9	---GLQGDVVHGTATQVDGNKTIIRNSVDAKQFNIDQNEVQFLQENNNSAVFNRVTSNQISQLILDSNGQVFLINPNIGKDAIINTNGFTASTLDISNENIKARNFTFEQTKDKALAEIVNHGLITVGKDG----SVNLIGGKVKNEG----VISVNGGSISLLAGQKITISDIINPTITYSIAAPENEAVNLGDIFAKGG---NINVRAATIRNQGKLSADSVSKDKSGNIVLSAKEGEAEIGGVISAQNQQAKGGKLITGDK--VTLKTGAVIDLSGKEGGETYLGGDERGEGKNGIQLAKKTSLEKGSTINVSGKE--KGGRAIVWGDIALIDGNINAQGSGD---------IAKTGGFVETSG-------DLFIKDNAAKEWLLD-----------------------------
10	SPARKS	3h09a	0.137	0.976	2.214	threading_10	ANGNNLTRNIDDGARLVNHNTSKTSTVTITGESLITDPNTITPYNIDDNPYAFRRIKDGGQLYLNLENYTYYALRKGASTRSELPKNSGESNENWLYMGKTSDEAKRNVMNHINNERMNGFNGYFGEEEGKNNGNLNVTEQNRFLLTGGTNGDLKVEKGTLFLSGRPTPHARDIAGISSTKKDFAENNEVVVEDDWINRNFKATNINVTNNATLYSGRNVANITSNITASD-----NAKVHIGYKAGDTVCVRSDYTGYVTCTTDKLSDKALNSFNATNVSGNVNLSGNANFVL--GKANLFGTISGTGNSQVRLTENSHWHLTGDSNVNQLNLDKGHIHLNAQNDTYNTLTVNSLSGNGSFYYLTDLSNKQGDKVVVTKSATGNFTLQVADKTGEPTKNE--LTLFD-ASNATRNNL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.803 to 1dabA SCOP code=b.80.1.7	TM-score=0.833 to 1dabA SCOP code=b.80.1.7	TM-score=0.839 to 1dabA SCOP code=b.80.1.7	TM-score=0.795 to 1dabA SCOP code=b.80.1.7	TM-score=0.830 to 1dabA SCOP code=b.80.1.7