Template-based Modeling Results for ARCD_ECOLI

Submitted Primary Sequence

>Length 460
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG
CCCCCCHHHHHHHHHHHHCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG
5543101010000000000000000002100321211010000000000000000000101322132310100001200030000000000000000000000000000001002123021113122110000000000000001010020010011000001000000000000010223102111211221211131010000000000000100000021022333113100000000000000000001000122201313210000001210020010000000000000000000000010001002231002000220332011000000000000000001001200200110000000000000000001012332230000000000000010010100000000000000000101222333311231100000000000000011123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG
1	MUSTER	3l1lA	0.278	0.891	3.340	threading_1	-AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTG--GIAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPIL-------KDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETY-------------MAAIQSTLNVTLWSFIGVESASVAAGVVKNPRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPY-------------------------
2	SPARKS	3ob6a	0.268	0.915	8.524	threading_2	DAHKVGLIPVTLMVSGNIMGSGVFLLPANLAS--TGGIAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPILK-------DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGL--GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSAS-PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQL----SSISPGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNNRLHKNPYPLDA----------------------
3	PROSPECT2	3gi8C	0.179	0.922	3.493	threading_3	KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAG-RNLPETFILSGIYALLVAYSYTKLGAKIV-SNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYF------LPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIFAGLITIHPSYVIPDLAPSA-----VSGMIFASAIFFLSYMGFGVITNASEHIENKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFK-STEGLYITSALGVLFALL-----FNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNM-----------------YVKS
4	PPA-I	3l1lA	0.275	0.900	4.839	threading_4	-AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTG--GIAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK-------DPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA-------------AIQSTLNVTLWSFIGVESASVAAGVVKNKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVS-ASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA---------------------
5	HHPRED-l	3l1l_A	0.261	0.900	9.129	threading_5	-AHKVGLIPVTLMVSGAIMGSGVFLLPANLAS-TGG-IAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPIL-------KDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAA-------------IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIAIGGVLIAAVCYVLSTTAIMGMIPNAALRVSA-SPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPTKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA---------------------
6	HHPRED-g	3l1l_A	0.262	0.896	8.029	threading_6	-AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLA-CWIGNIAMVVIGVGYLS-YFFPIL-----KDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGE---TYMAA----------IQSTLNVTLWSFIGVESASVAAGVVKNPRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPF-GDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPTKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPL-----------------------
7	SP3	3ob6a	0.268	0.915	8.160	threading_7	DAHKVGLIPVTLMVSGNIMGSGVFLLPANLA--STGGIAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFF-------PILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGL--GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSAS-PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSIS----PGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNNRLHKNPYPLDA----------------------
8	SAM-T99	3l1lA	0.273	0.900	10.505	threading_8	-AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDP-------WVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYM-------------AAIQSTLNVTLWSFIGVESASVAAGVVKNPRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPF-GDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA---------------------
9	MUSTER	3gi9C	0.183	0.913	2.987	threading_9	KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVS-NAGPIAFIHKAIGDIITGALSILLWMSYVISIALFAKGFAGYFLPL--------IAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDL-----APSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWF-KSTEGLYITSALGVLFALLF-----NMEGVASITSAVFMVIYLFVILSHYILIDEVGGRIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKNNMYVKSLES-------------------
10	SPARKS	3l1la	0.278	0.898	7.518	threading_10	-AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTG--GIAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPIL-------KDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETY-------------MAAIQSTLNVTLWSFIGVESASVAAGVVKNPKNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNNRLHKNPYPLDA----------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.672 to 2q6hA SCOP code=f.54.1.1	TM-score=0.668 to 2q6hA SCOP code=f.54.1.1	TM-score=0.692 to 2q6hA SCOP code=f.54.1.1	TM-score=0.703 to 2q6hA SCOP code=f.54.1.1	TM-score=0.668 to 2q6hA SCOP code=f.54.1.1