Template-based Modeling Results for YDFH_ECOLI

Submitted Primary Sequence

>Length 228
MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE
553323233232112200310131012020221230213200320411211012002202520002011230010140112102200100100100002200220232102202300320220144322310030021002000200303101200220220011001111322211310031023001003321030013001200220031024003312311344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE
1	MUSTER	2hs5A	0.190	0.899	2.670	threading_1	----------TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDELRSVWNEARLVFHVD--DAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR---------
2	SPARKS	2hs5a	0.190	0.899	4.649	threading_2	----------TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDELRSVWNEARLVFH--VDDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR---------
3	PROSPECT2	3dbwA	0.180	0.904	2.990	threading_3	V----------DLVRTKVYNLLKEILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETRIEVFCLENYFDKIAGSE----ELLEIKGEIDDVAASAAREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVR----HLNERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNLYTY----ERS
4	PPA-I	2hs5A	0.190	0.899	3.805	threading_4	----------TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDELRSVWNEARLVFHVD--DAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR---------
5	HHPRED-l	2hs5_A	0.195	0.899	4.009	threading_5	----------TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDEL-RSVWNEARLVFHV-DDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR---------
6	HHPRED-g	2hs5_A	0.195	0.899	3.842	threading_6	----------TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGFD--PATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDEL-RSVWNEARLVFHV-DDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR---------
7	SP3	2hs5a	0.195	0.899	4.340	threading_7	----------TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDELR-SVWNEARLVFHV-DDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR---------
8	SAM-T99	3fmsA	0.205	0.855	4.296	threading_8	------------VRTKVYNLLKE-ILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEK------FIRETIETRIEVFCLENYFDKISEELLEIKGEIDDVAASAAREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVRHLN----ERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNL----------
9	MUSTER	3fmsA	0.189	0.904	2.654	threading_9	---------VDLVRTKVYNLLKE-ILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETRIEVFCLENYFDKIAGS----EELLEIKGEIDDVAASAAREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVRHLN----ERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNLYTYER--S--
10	SPARKS	3ihua	0.160	0.877	4.453	threading_10	-----------SASDTVFFGIS-GLELGTFVPGQRLVETDLVAHFGVGRNSVREALQRLAAEGIVDLQRHRGAVIRRLSLQETLDVLDVAERTGLLARAATRGSGNQPQVQALRASVQALVAAEKAQDGETFSNARRHFYRTLLEGD-NRELRRLFPTIHPIVHAQHRLA-----SLRQRLDDYRRIATAVLAGEPDAAEAAGAAHVKNVRGAILDRQ----------

Predicted Tertiary Structure


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TM-score=0.943 to 2hs5A SCOP code=a.4.5.6	TM-score=0.626 to 2hs5A SCOP code=a.4.5.6	TM-score=0.944 to 2hs5A SCOP code=a.4.5.6	TM-score=0.698 to 2hs5A SCOP code=a.4.5.6	TM-score=0.943 to 2hs5A SCOP code=a.4.5.6