Template-based Modeling Results for YDEU_ECOLI

Submitted Primary Sequence

>Length 466
MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
CCCCCCCCCCEEEEECCEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
5433224301000010111122010000000123323101000213241202010111222223223001001011312120011201010011001002142334310001122311222222222222222323122212220011000000001100220122112231122222322110000100112121322313120201110000000001122224321000000000102010222222232314220100000001112211420000000000000100011223223323120000002021102002112232222200010101000000222332343102021223110101000101010212233242220100010000121412002121210123124100101000102023200010100011134122102010001032
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
1	MUSTER	3aehA	0.194	0.586	1.633	threading_1	------------------------------------------------------------------------------------------------------------------------------------GTMARNDGQGKAAATFMHISYNNFITEVDNLNKRMGD------LRDINGEAGTWVRLLNGSGSADGG-----FTDHYTLLQMGADRKHE--LGSMDLFTGVMATYTDTDASADL------YSGKTKSWGGGFYASGLF----RSGAYFDVIAKYIHNENKYDLNFAGKQNFRSHSLYAGAEVGYRYHLT---------DTTFVEPQAELVWGRLQGQN------------SVNPLVGRTGVVSGKTFSGKD-------WSLTARAGLHYEFDLT----------DSRKDSRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDDAINANIRYSF
2	HHPRED-l	3kvn_X	0.153	0.923	4.920	threading_2	IAAASTSPQGIADG-NNWAVGGYRNTLLRSRDGGADPNALYYITGGGNGARYIVVWLLPDLGLTPATFG-----GPLQSGTFNALTAQLSQAGANVIPLKEGMANPASFGLANLIGTNTMYDPSKLLFN-DSVHPTIQRLIAPWETLLPEMAHGTLRAYQDELRSQWQADWE---NWQNVGQWRGFVGGGGQRLDFDSQDSAASGDGNGYNLTLGGSYRID-----EAWRAGVAAGFYRQKLEAGAK----DSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDLKRKFAGGERSEKGDTNGHLWAFSARLGYDIAQQA-------DSPWHLSPFVSADYARVEVDGYSEKGALDYDDQKRSSKRLGAGLQGKY-A-------FGSDTQLFAEYAHEREYEDDTQDLTFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKGED-DTQQSVSLALSLD-
3	HHPRED-g	3ml3_A	0.339	0.247	4.026	threading_3	VILNNSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEIAGHASGITYVAVTNEGGSGDKTLEGVQIISTDSSDKNAFI-QKGRIVAGSYDYRLKQGTALNTNKWYLTSQMD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	SPARKS	3slja	0.176	0.635	4.861	threading_4	-------------------------------------------------------------------------------------------------------------------------------------HHHANKEATRNAAALFSVDYKAFLNEVANLNKRMGD------LRDINGEAGAWARIMSGTGSASG-----GFSDNYTHVQVGVDKKHE--LDGLDLFTGFTVTHTDSSAS------ADVFSGKTKSVGAGLYASAM----FDSGAYIDLIGKYVHHDNEYTATFAGLRDYSTHSWYAGAEAGYRYHVT---------EDAWIEPQAELVYGSVSGKQFAWKDQLSMKDKDYNPLIGRTGVDVGKSFSG-----KDWKVTARAGLGYQFDLLAVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
5	PROSPECT2	3qq2A	0.224	0.517	2.730	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAGGPWARTFSERQQISNA-----YDQTVSGLEIGLDRGW--SASGGRWYAGGLLGYTYADRTYPGD-----GGGKVKGLHVGGYAAYVG----DGGYYLDTVLRLGRYDQQYNIAGTDGGRYRTSGAAWSLEGGRRFELP---------NDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIA----LAGGNIVQPYARLGWTQEFK----------------SGRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF
6	PPA-I	3qq2A	0.228	0.517	1.906	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAGGPWARTFSERQQISNA-----YDQTVSGLEIGLDRGW--SASGGRWYAGGLLGYTYADRTYPG-----DGGGKVKGLHVGGYAAYV----GDGGYYLDTVLRLGRYDQQYNIAGTDGGDYRTSGAAWSLEGGRRFELP---------NDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRR----IALAGGNIVQPYARLGWTQEFKS----------------GRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF
7	HHPRED-l	3slt_A	0.176	0.622	5.312	threading_7	---------------------------------------------------------------------------------------------------------------------------------------HANKEATRNAAALFSVDYKAFLNEVSNLNKRMGDLRDI------NGEAGAWARIMSGTGSAS-----GGFSDNYTHVQVGVDKKHEL--DGLDLFTGFTVTHTDSSASADV------FSGKTKSVGAGLYASAMFD----SGAYIDLIGKYVHHDNEYTATGLGTRDYSTHSWYAGAEAGYRYHVT---------EDAWIEPQAELVYGSVSGKQFAWDQGMHLKDKDYNPLIGRTGVDVGKSFSG-----K--DWKVTARAGLGYQFDANETVLDGKRIK-GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYS-
8	HHPRED-g	3slt_A	0.171	0.629	5.008	threading_8	-------------------------------------------------------------------------------------------------------------------------------------HHHANKEATRNAAALFSVDYKAFLNEVSNLNKRMGDLRDI------NGEAGAWARIMSGTGSA-----SGGFSDNYTHVQVGVDKKHE--LDGLDLFTGFTVTHTDSSASAD------VFSGKTKSVGAGLYASAMFD----SGAYIDLIGKYVHHDNEYTATFLGTRDYSTHSWYAGAEAGYRYHVTE---------DAWIEPQAELVYGSVSGKQFAWDQGMHLKDKDYNPLIGRTGVDVGKSFSG-------KDWKVTARAGLGYQFDANETVLRGKRIK-GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
9	SP3	3slja	0.162	0.635	5.346	threading_9	----------------------------------------------------------------------------------------------------------------------------------------HHHANKEATRNAAALFSVDYKAFLNEVANLN---KRMGDLRDINGEAGAWARIMSGTGSASGG-----FSDNYTHVQVGVDKKHE--LDGLDLFTGFTVTHTDSSAS------ADVFSGKTKSVGAGLYASAMFD----SGAYIDLIGKYVHHDNEYTATFAGLRDYSTHSWYAGAEAGYRYHVT---------EDAWIEPQAELVYGSVSGKQFAWKDQLSMKDKDYNPLIGRTGVDVGKSFSG-----KDWKVTARAGLGYQFDLLAVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
10	SAM-T99	3qq2A	0.230	0.513	5.386	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGPWARTFSERQQIS-----NAYDQTVSGLEIGLDRGW--SASGGRWYAGGLLGYTYADRTYP-----GDGGGKVKGLHVGGYAAYVGDG----GYYLDTVLRLGRYDQQYNDGGRVTADYRTSGAAWSLEGGRRFELP---------NDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIAL----AGGNIVQPYARLGWTQEF-----------------SGRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.666 to 1uynX SCOP code=f.4.5.1	TM-score=0.730 to 1uynX SCOP code=f.4.5.1	TM-score=0.666 to 1uynX SCOP code=f.4.5.1	TM-score=0.423 to 1dabA SCOP code=b.80.1.7	TM-score=0.671 to 1uynX SCOP code=f.4.5.1