Template-based Modeling Results for YDEQ_ECOLI

Submitted Primary Sequence

>Length 304
MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE
CCCEEEEHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCEEEEEECCCCEECCCEEEEECCCEEEEECCCCCCEECCCEEEEEEEEEECCCCCCCCEEEECCEECCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCEEEECCEEEECCCCEEEECCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCEECCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE
5432110000000000000030000001121110022210101011222121111000002210102131221111200000200000211322301011120202021223200010124222111010000112222010022020001000010021222323100000002220102201010234201020231311110000010123220101010111222320000112222402000000022222032122010011332301000000001123411102010100010223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE
1	MUSTER	1klfP	0.502	0.911	2.733	threading_1	------------------------FACKTANGTAIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQ-FVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASF-SPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
2	SPARKS	1klfb	0.502	0.911	6.659	threading_2	------------------------FACKTANGTAIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDF-QFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTAS-FSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
3	PROSPECT2	1klfb	0.502	0.911	3.056	threading_3	------------------------FACKTANGTAIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDF-QFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTAS-FSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
4	PPA-I	1klfP	0.502	0.911	4.605	threading_4	------------------------FACKTANGTAIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDD-FQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASF-SPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
5	HHPRED-l	3jwn_H	0.507	0.908	7.303	threading_5	------------------------FACKTANGTAIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPET-ITDYVTLQRGSAYGGVLSSFSGTVKYNGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSD-DFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTA-SFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVY-
6	HHPRED-g	3jwn_H	0.505	0.911	8.063	threading_6	------------------------FACKTANGTAIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSSFSGTVKYNGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDF-QFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTAS-FSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
7	SP3	1klfb	0.502	0.911	6.330	threading_7	------------------------FACKTANGTAIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDF-QFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTAS-FSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
8	SAM-T99	1klfP	0.495	0.911	6.451	threading_8	------------------------FACKTANGIPIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETITD-YVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQ-FVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTA-SFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
9	MUSTER	1klfP1	0.455	0.513	1.263	threading_9	------------------------FACKTANGTAIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQ-FVWNIYANNDVVVPT--------------------------------------------------------------------------------------------------------------------------
10	SPARKS	1klfb1	0.455	0.513	4.249	threading_10	------------------------FACKTANGTAIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDF-QFVWNIYANNDVVVPT--------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.934 to 1klfP SCOP code=b.2.3.2	TM-score=0.943 to 1klfP SCOP code=b.2.3.2	TM-score=0.900 to 1klfP SCOP code=b.2.3.2	TM-score=0.900 to 1klfP SCOP code=b.2.3.2	TM-score=0.879 to 1klfP SCOP code=b.2.3.2