Template-based Modeling Results for YDEH_ECOLI

Submitted Primary Sequence

>Length 296
MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV
55331220110012012002200200110000001332223311232010102002002310322222120021022012202300220011002221121102101200110011012112210112112120110101110120012103213312000000001102201011001000000210020013102331000111111000002203331012002200300231212233220100000000102343203100010040012023322200000233322343
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV
1	MUSTER	3breB	0.218	0.976	2.252	threading_1	LDGAV-MVAMIGEAVRRSLASEFHFCSDPQQAVAVANQIKPTVLVMPGVDGLTLLAAYRGNPATRKEEPTVKSAAFAAVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLRSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRSHLTVSIGVSTLVPGQTFRVLIEMADQALYQAKNNGRNQVGLMEQP------
2	SPARKS	3brea	0.217	0.966	4.618	threading_2	SLASEAGIDFHFCS---DPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDRPGSHLTVSIGVSTLVGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQ-------
3	PROSPECT2	3breA	0.231	0.922	3.223	threading_3	SLASEAGIDFHFCSDPQQAVAVANQILTLLAAYRGNPATRDIPKEEPTVKS----AAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLE------------TNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQIDQPRPGSHLTVSIGVSTLVPGQTFRVLIEMADQALYQAKNNGRNQVGLMEQ-------
4	PPA-I	3i5cB	0.300	0.642	3.026	threading_4	---------------------------------------------------------------------------------------------------RMKQLEDKVEELLSKNYHLENEVARLKKLVNSDGLTGLSNRRHFDEYLEMEWRRSLQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRSHLTVSIGVSTLVPGGTFRVLIEMADQALYQAKNNGRNQVGLMEQ-------
5	HHPRED-l	1w25_A	0.232	0.976	6.206	threading_5	LTKDDVMLFARVRSLTRF-KLVIDELRQREASGRRDGLGGRLIVDDNERQAQRVAAELGVEHRPVIESDPEKAKFLRFTAALRSEERTRQIGVNDILSRPIDPQELSARVKTQIRDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAREMLNVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAVVGKAAH------
6	HHPRED-g	1w25_A	0.226	0.973	5.839	threading_6	ANVRL--LEAKLTAEYYEVMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAREMLNVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAVVGKAAH------
7	SP3	3i5aa	0.216	0.970	4.266	threading_7	QAMIGEAVRRGLAGHESIDFHFCADPHQAIAQAVQIKPTDLVMPGLDGLTLVEYRSNPLTRDITKEDPLIKSAAFAALVKLPDNIELVARIRYHSRSYMTLLQRDEAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRATRAQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHPVPGSSLTVSIGVATVTPQQHSRQLILDADKGLYLAKNNGRNQVAAG---------
8	SAM-T99	2v0nA	0.237	0.899	4.955	threading_8	-------------------VEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSAIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRTLGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVGREMLNVTISIGVSATAGEDTPEALLKRADEGVYQAKASGRNAVV-----------
9	MUSTER	3i5cB	0.300	0.642	2.204	threading_9	---------------------------------------------------------------------------------------------------RMKQLEDKVEELLSKNYHLENEVARLKKLVNSDGLTGLSNRRHFDEYLEMEWRRSLRSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRSHLTVSIGVSTLVPGQTFRVLIEMADQALYQAKNNGRNQVGLMEQ-------
10	SPARKS	3i5aa	0.213	0.970	4.610	threading_10	QAMIGEAVRRGLAGHESIDFHFCADPHQAIAQAVQIKPTVILQLVMPGLDGLTLVREYRSNPLTKEDPLIKSAAFAALVKLPDNIELVARIRYHSRSYMTLLQRDEAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRATRDQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHPVPGSSLTVSIGVATVQVGQHSRQLILDADKGLYLAKNNGRNQVAAG---------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.682 to 2v0nA SCOP code=c.23.1.1	TM-score=0.693 to 2v0nA SCOP code=c.23.1.1	TM-score=0.694 to 2v0nA SCOP code=c.23.1.1	TM-score=0.681 to 2v0nA SCOP code=c.23.1.1	TM-score=0.693 to 2v0nA SCOP code=c.23.1.1