Template-based Modeling Results for YDDK_ECOLI

Submitted Primary Sequence

>Length 318
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKT
CCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCEEECCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCEEECCCCCCCCCCHHHCCCCCEEECCCCCCCCCCHHHHCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKT
533322133133011000131202301232033011010131102212212310211111202221033121211321210210111221010001212122123203101101023120231222213301200022110320222103021022000131103302133021011000121202202132032011000131202301222132011000131302202330032021010131102302210230220110001312032022300220310210202313023022300220120121233244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKT
1	MUSTER	3o6nA	0.214	0.956	2.571	threading_1	MQTQDVYITLNNQKIVTFKNSTMRKLPLDSFRQVELLNLNDLQIEEIDTAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS------SLPGIFHNTPKLTTLSMSNNNLERIEDQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAI--PIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTALLNYPGLVEVDLSYNELEKIMYHPFQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVER-NQPQFDRLENLYLDHNSIVTLKLSTHHTLKNL---TLSHND
2	SPARKS	3o6na	0.213	0.959	3.820	threading_2	MQTQDVYFGLNNQKIVTFKNSTMRKLPLDSFRQVELLNLNDLQIEEIDTAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRG-----IFHNTPKLTTLSMSNNNLERIEDDATTSLQNLQLSSNRLTHVDLSL--IPSLFHANVSYNLLSTLAIP--IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTALLNYPGLVEVDLSYNELEKIMYHPFQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNL---TLSHND
3	PROSPECT2	3bz5A	0.180	0.943	4.522	threading_3	ATDTISEEQLATLTSLDCHNSSITDMTIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNLDVTPLTKLT------------YLNCDTNKLTKLVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLDVTHNTQLYLLDCQAAGITELD---LSQNPKLVYLYLNNTELTELDVSHNTKLKSLMNIEPGDGE
4	PPA-I	3o6nA	0.200	0.959	3.794	threading_4	VYFGFEDITLNNQKIVTFKNSTMRKLPLDSFRQVELLNLNDLQIEEIDYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-----SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIP--IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTALLNYPGLVEVDLSYNELEKIMYHPFQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQP-QFDRLENLYLDHNSIVTLKLSTHHTLKN---LTLSHND
5	HHPRED-l	2id5_A	0.190	0.912	2.022	threading_5	AVPE----GIPETRLLDLGKNRIKTLNFASFPHLEELELNENIVSAVEPAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY-----MFQDLYNLKSLEVGDNDLVYISHRAFSGLEQLTLEKCNLTSIPTEALSHHGLIVLRLRHLNI------------------NAIRDYSFKRLYRLKVLEISHWPYLDTMCLYGLNLTSLSITHCNLTYLAVRHLVYLRFLNLSYNPISTIESMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN-
6	HHPRED-g	2id5_A	0.160	0.981	1.663	threading_6	GCPPRCECS-AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP-----LGVFTGLSNLTKLDISENKIVILLDYMFYNLKSLEVGDNDLVYISHRAFGLNSLEQLTLEKCNLTSIPLSHLHGLIVLRLRHLNINAIRFKRLYRLKVLEISHWPYLDTMCLYGLNLTSLSITHCNLTAVPYLAVVYLRFLNLSYNPISTIESMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP
7	SP3	3o6na	0.214	0.956	3.768	threading_7	MQTQDVYFGLNNQKIVTFKNSTMRKLPLDSFRQVELLNLNDLQIEEIDTAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL------SSLPRIFHNTPKLTTLSMSNNNLERIEDDATTSLQNLQLSSNRLTHVDLSL--IPSLFHANVSYNLLSTLAI--PIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTALLNYPGLVEVDLSYNELEKIMYHPFQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQP-QFDRLENLYLDHNSIVTLKLSTHHT---LKNLTLSHND
8	SAM-T99	2id5B	0.162	0.953	2.521	threading_8	---PPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQFASFPHLEELELNENIVSAVEPGA----------FNNLFNLRTLGLRSNRLKLIPLGLSNLTKLDISENKIVILLDYMFQNLKSLEVGDNDLVYIHRAFSGLNSLEQLTLEKCNLTSIPLSHLHGLIVLRLRHLNITMTPNCLYGNLTSLSITHCNLTAVPVRHLVYLRFLNLSYNPISTIEGSMLLRLQEIQLVGGQLAVVPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQ--
9	MUSTER	1xecA	0.180	0.890	2.549	threading_9	------------------------VCPFRCQCHLRVVQCSDLGLEKVPK--DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPG-----AFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNLNQMIVVELGTNPLKSIEFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAAGLNNLAKLGLSFNSISAVDNGSLPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFTKKASYSGVSLFSNPVQEIQPSTFRCVYVRAAVQL----
10	SPARKS	1o6sa	0.201	0.972	3.686	threading_10	IKSIDGVEYLNNLTQINFSNNQLTDITPKNLTKLVDILMNNNQIADIT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLLANLTTLERLDISSNKVSDISLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIGLASLTNLTDLDLANNQISNLPLSGLTKLTELKLGANQISNIPLAGLTALTNLELNENQLEDIPISNLKNLTYLTLYFNNISDI-SPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDL--TPLANLTRITQLGLNDQA

Predicted Tertiary Structure


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TM-score=0.768 to 1g9uA SCOP code=c.10.2.6	TM-score=0.774 to 1g9uA SCOP code=c.10.2.6	TM-score=0.768 to 1xecA SCOP code=c.10.2.7	TM-score=0.768 to 1g9uA SCOP code=c.10.2.6	TM-score=0.778 to 1g9uA SCOP code=c.10.2.6