Template-based Modeling Results for YDCJ_ECOLI

Submitted Primary Sequence

>Length 447
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEECHHHCCCCCCCCHHHHHHHHHHHHHCCCCEECEECCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECEEHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL
553312122002100200010023101210100200120122013312311331232330110112211102211021011001001100010000010230101000000211132104301120011101121032320122022004323211330120022024312033210220032003002113212122310210121031000000021020210012111032012002412030221120123230200012011301322011123430000010021121111112201300120022023233221011001211330121121014210000101013313233322322320210043100101100131001000000021112332324231220121014103030011121123013302320233
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL
1	MUSTER	2rjbA	0.973	0.913	3.407	threading_1	-ANSITADEIREQFSQAS--AYQQEVPQYGTLLELVADVNLAVLENNPQLHEKV-NADELARLNVERHGAIRVGTAQELATLRR-FAI--GYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSP--ECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAHQ---------HLQETFRTFPDSE-FLRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSN-------------------ASREAFEQALGCPVLDEFQLYQEAEERSKRRCGL-
2	SPARKS	2rjba	0.963	0.913	10.070	threading_2	-ANSITADEIREQFSQAS--AYQQEVPQYGTLLELVADVNLAVLENNPQLHEKV-NADELARLNVERHGAIRVGTAQELATLRRFAI---GYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQ--SPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAHQ---------HLQETFRTFPDS-EFLRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSNA-------------------SREAFEQALGCPVLDEFQLYQEAEERSKRRCGL-
3	PROSPECT2	2rjbA	0.958	0.913	4.462	threading_3	-ANSITADEIREQFSQAS--AYQQEVPQYGTLLELVADVNLAVLENNPQLHEKV-NADELARLNVERHGAIRVGTAQELATLRRF---AIGYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQ--SPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAHQH---------LQETFRTFPDSE-FLRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSNAS-------------------REAFEQALGCPVLDEFQLYQEAEERSKRRC-GL
4	PPA-I	2rjbA	0.966	0.913	8.264	threading_4	-ANSITADEIREQFSQAS--AYQQEVPQYGTLLELVADVNLAVLENNPQLHEKV-NADELARLNVERHGAIRVGTAQELATLRRF---AIGYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSPE--CGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAHQ---------HLQETFRTFPDSEF-LRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSN-------------------ASREAFEQALGCPVLDEFQLYQEAEERSKRRCGL-
5	HHPRED-l	2rjb_A	0.998	0.906	6.782	threading_5	-ANSITADEIREQFSQA----YQQEVPQYGTLLELVADVNLAVLENNPQLHEK-VNADELARLNVERHGAIRVGTAQELATLRR-FAI---YPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQS--PECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNA--------HQ-HLQETFRTFPDSEFL-RQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVS-------------------NASREAFEQALGCPVLDEFQLYQEAEERSKRRCGL-
6	HHPRED-g	2rjb_A	0.998	0.906	6.516	threading_6	-ANSITADEIREQFSQA----YQQEVPQYGTLLELVADVNLAVLENNPQLHEK-VNADELARLNVERHGAIRVGTAQELATLRR-FAI---YPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQS--PECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNA--------HQ-HLQETFRTFPDSEFL-RQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVS-------------------NASREAFEQALGCPVLDEFQLYQEAEERSKRRCGL-
7	SP3	2rjba	0.963	0.913	10.012	threading_7	-ANSITADEIREQFSQAS--AYQQEVPQYGTLLELVADVNLAVLENNPQLHEKV-NADELARLNVERHGAIRVGTAQELATLRRFAI---GYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQ--SPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAHQ---------HLQETFRTFPDS-EFLRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSNA-------------------SREAFEQALGCPVLDEFQLYQEAEERSKRRCGL-
8	SAM-T99	2rjbA	0.958	0.911	11.933	threading_8	-ANSITADEIREQFSQA--SAYQQEVPQYGTLLELVADVNLAVLENNPQLHEKVNA-DELARLNVERHGAIRVGTAQELATLRRFAIG---YPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQS--PECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAHQH---------LQETFRTFPDS-EFLRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSNA-------------------SREAFEQALGCPVLDEFQLYQEAEERSKRRCG--
9	MUSTER	3lhoA	0.230	0.546	0.940	threading_9	GHTD------VNALFAALWQDYIKT-PSAAKIHQLLGH-----------GAPIINDHIALRTFNIAKVN---------LSVLAKHFTSIGYVDSGDYKFEQKK--LIAKHFEHPDPK-----QPKVFISELLVEEF-SPEVQKSIHGLIDQVDI------------------AATTADNFIYS-------GRHWDVDKATYQALLAESEYAAWVAAL-GYRANHFTPEFERIEDVNQALKQAGFVLNS--SGGEVKGSPEVLLEQSSTADKVVVNFTDGDV-EIPSCFYEFARR----YPANGQLYTGFVAA---------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	3lhoa	0.221	0.546	2.755	threading_10	--GHTDVNALFAALWQDYI-----KTPSAAKIHQLLG-----------HGAPIINDHIALRTFNIAKVN---------LSVLAKHFTSIGYVDSGDYKFEQKK--LIAKHFEHPDP-----KQPKVFISELLVEEF-SPEVQKSIHGLIDQVD------------------IAATTADNFIYS-------GRHWDVDKATYQALLAESEYAAWVAAL-GYRANHFTPEFERIEDVNQALKQAGFVLNS--SGGEVKGSPEVLLEQSSTADKVVVNFTDGDV-EIPSCFYEFARR----YPANGQLYTGFVAA---------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.485 to 1jc5B SCOP code=d.32.1.4	TM-score=0.485 to 1jc5B SCOP code=d.32.1.4	TM-score=0.484 to 1t47A SCOP code=d.32.1.3	TM-score=0.485 to 1jc5B SCOP code=d.32.1.4	TM-score=0.484 to 1jc5B SCOP code=d.32.1.4