Template-based Modeling Results for YDAW_ECOLI

Submitted Primary Sequence

>Length 203
MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACHGVLIITVITPSPTKNSATKMPEN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACHGVLIITVITPSPTKNSATKMPEN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACHGVLIITVITPSPTKNSATKMPEN
55313212221121200020001003211302121002202121320022013023111012211000001232323222323123312222223112120010034311320320011111202200100110223010021232020100021230212141220010001012210200000000012224322242345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACHGVLIITVITPSPTKNSATKMPEN
1	HHPRED-l	3lmm_A	0.138	0.394	1.361	threading_1	LPVLELVSSIARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQAPLIIAHDGVWLLGNACREILRKE---------------------------------------------------------------------------------------------------------------------------
2	HHPRED-g	3lmm_A	0.115	0.384	1.221	threading_2	PVLPELVSSVARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKENALEAARQAPLIIAH---DGVWLLGNACREILRKVE--------------------------------------------------------------------------------------------------------------------------
3	HHPRED-l	2jt1_A	0.219	0.315	1.095	threading_3	-------------------------------------------------------------------------------------------MSES-IVTKIISIVQERAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVN-AGKGPG------------------LWRLLE----------------------------
4	HHPRED-g	2jt1_A	0.159	0.340	1.098	threading_4	----------------------------------------------------------------------------------------MSESIVTKIISIVQERQNMDAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVN-AGKGV----PGLWRLLE-----------------------------------------
5	HHPRED-l	2k02_A	0.151	0.360	1.069	threading_5	---------------------------------------------------------------------------------------------MASL-MEVRDMLALQGRMEAKQLSARLQTPQPLIDAMLERMEAMGKVVRITSEGSCKSCPEGKA--------ACRQEWWALR----------------------------
6	MUSTER	1c0wB	0.124	0.837	0.627	threading_6	LVD---------TTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDR-SLQMTPTG----------------------RTLATAVMRKHRLA-ERLLTDIIGLDINKVHDEACRWESDEVERRLVKVKDVSRSPFGNPIPGLDELGVAPGTRVIDAATSMPRKVRIVQINEIFQVETDTQLVGS
7	SPARKS	2pjpa	0.100	0.591	0.801	threading_7	----------FEEQQAIWQKAEPLFGD-EPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEF--------------------ANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRR---GNDHLLRD-------------------------------------------------
8	PROSPECT2	3e4oA	0.086	0.970	0.943	threading_8	AGLAGQSRIDASLKRAVVERQRALPLVL--ADDAAIRGALLSPDRPSLDRINRKLEALATSAEAAVIYLIDRSGVAVAASNWQEPTSFVGNDYAFR--DYFRLAVRDGAEHFAGTVSKRPGLEFDGVEADWQ--ASGKPAYVTDRRGIVLITSLFTTKPIAEDRLAPIRESLQFGDAPLLPLPFRKIEARPDGSSTLDALLPG
9	PPA-I	2pjpA	0.100	0.591	0.733	threading_9	----------FEEQQAIWQKAEPLFG-DEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEF--------------------ANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRD----------------------------------------------------
10	HHPRED-l	1mkm_A	0.130	0.532	0.939	threading_10	-----------------------------------------------------------------------------------------MNTLKK-AFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLR-KKDKRYVP---GYKLIEFNIRDIAHDHDIMKRTETVFEGVYIDKVEGQSIPMVSMKVDL-

Predicted Tertiary Structure


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TM-score=0.495 to 1lvaA SCOP code=a.4.5.35	TM-score=0.470 to 1xmkA SCOP code=a.4.5.19	TM-score=0.530 to 1lvaA SCOP code=a.4.5.35	TM-score=0.559 to 2f5cA SCOP code=a.4.5.24	TM-score=0.434 to 1j5yA SCOP code=a.4.5.1