Template-based Modeling Results for YCJX_ECOLI

Submitted Primary Sequence

>Length 465
MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECHHHHHCCCCCCEEEEEEECCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCEEEEEEECEECCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
443133202200320022200000000142110000000001002122122011011133310100211123212012020120012011321211322320010001020202310132133201000100101010001000012101100310001032321300230020032023223132310110020012001102431021021010002121210100100101323222323223233220001022102200332031002300230121000000010022013002201300130020012122200120012101100000030120012102101200220022013102221020100000001012311022322302001013133211000111301230113221233212032120321323320110201000211122324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
1	PROSPECT2	1w36B1	0.112	0.901	1.305	threading_1	MSDVAETLDPLRLPLQGERL---IEASAGTGKTFTIAALYLRLL-LGLGGSAAFPRPLTVEELLVVTFTEAATA-----ELRGRIRSNI-------------------------HELRIACLRE--------TTDNPLYERLLEEIDDKAQAAQWLLLAERQMDERMLNLNAFESGMLFEQQLIEDE--SLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDIRDLVITRALAEIRETVAREKRRRGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRTYMKARSEVHAWRSNSVNKLFSQTDDAKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQ--RGEALLMNGDDARPVRPSVYLSNRDRLEVTIHKSKGLEYPLVWLPFTNFRVQEQAFYHDRHSFEAVLDLNARRRGDKKGDTDVHQSALGRLLQKGEP
2	PPA-I	3szrA1	0.135	0.684	1.044	threading_2	VRPCIDLIDSLRALGVEQDLAIAVIGDQSSGKSSVLEALSG--VAVTRCPLVLKLKKLVNEDKWRGKVSYQIEIS----DASEVEKEINKAQNAIAGEGMGISHELITLEISS----------RDVPDLTLIDLPG---GNQP---ADIGYKIKTLIKKYIQRQETI------SLVVVPSNVDIATTEALSMAQEVDPEGDRTILTKPDLVDKGT-----EDKVVDVVLVFHLKKMIVKCRGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKPC-----LAEKLTSELITCKSLPLLENQIKETHQR----ITEELQKYGVDIPERSD---------TSDKRKFLKERLARLTQARRRLAQFPG------------------------------------------------------------------------------------------------
3	PROSPECT2	1l5aa	0.081	0.828	1.274	threading_3	MLLAQKPFWQRHLAYPHINTVAHSLRLTGPLDTTLLLRALHLTVSESAQGELYWHPFSPPIDYQ---------DLSIHLEAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLSH--------SEHLIYTRAHHIVLGYGMML-FEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTS--------HRYWQDKQFWQGYLREAPDLTLTSAT---YDPQLSHAVSLSYTLNSQLNHLLLKLANANQIGWPDALVALCALYLESAEPSVAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFINILPFESPH-----------------------FADCQTELKVLA-----------SGSAEGINFTFRGSPQHELCLDI--TADLASYPQSHWQSHCERFPRF---------------FEQLVARLLAEPAA
4	PROSPECT2	1e9ra	0.102	0.761	1.266	threading_4	VGQSGGKLKRMTREKAKQVTVLLVNGATGTGKSVLLRELAYTGLLRGD---------------------------------------------------------RMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSF-------------------FNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITW-----REDMGPALRPLISAWVDVV----CTSILSLPEEPKRRLWLFIDELASLEKLASADALTKLDDVYGVKEAQTLRASFRSLVVLGGSRSLGEHEVERDRALERVRERVVMLPDLTAYVGFAGNRP---------------IAKVPLEIKQFANRQPAF-----------VEGT
5	PROSPECT2	2xheA	0.079	0.948	1.218	threading_5	HMSLKSAVKTVLTNSLRS------VADGGDWKVLVVDKPALRMIS-----ECARMSEILDLGVTVVEDVSKQRKVLPQFPTEENLDYVIRD---FADRTPTYEAAHLFFLSPVPDALMAKLASAKKYVKTLKEINTLFIPRVFTLNEPHGLVQYYGSRSSSYNIDHLVRRLSTLCTTMNVASSTSTPGTERMAMQLQKEIDMSVSQGLINAREDIYSYSTVDAGGREQQRQVVLGEDDDIWLQMRHLHISEVFRKVKSSFDEFCVSARRPQHREQMQKYSLHLDMSNAINMAFS--STIDSCTKAEQNIVTEEEQDGNKVRDFI--GEVASVV----VDRRVSTEDKLRCLMLCVLAKHELNNLLDNANIATPSRSIYNLEMLGATVVADRRGRKPKTMKRIERDMPYV--LSRWTPEYIATGQLDLESYPAVRDGPSVVQPKESAKPKLYNEIRCAYEVSQSSK
6	PROSPECT2	3qxyA	0.102	0.759	1.199	threading_6	LDPVACFLSWCRRVGLELSPKVAVSRQGTVAGELLFVVPRAALLSQHTCSIGGLLERERV----------ALQSQSGWVPLLLALHELQAPASRW---------------------RPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIR---SEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEKEPNSPVMVPAHLANHNANLEYSANCLRMVATQPIPKGHQMANWQLIHMAERHLVYERWDFLCKLEMVGEEGAFVIG-------REEVLTEEELTTTLKVLC----MPAEEFRELKDQKREEGSLTITNIPKLKASWRQLLQNSVLLTL-------------------------------------------------------QTYATDLKTDQGLLSNKEVYAKLSW------------REQQALQVRYGELTS
7	MUSTER	3qxyA	0.123	0.824	0.641	threading_7	LDPVACFLSWCRRVGLSPKVAVSRQG-TVAGYGMVAR------------------ESVQAGELL-FVV-P-RAALLSQHTCS--IGGLLERERVALQSQSGWVPLLLALLHELQRPYFALWPELGRLEH-PMFWP-EEERRCLLQGTGVPEAVEKDLANIRSEYQSIVLPFMEAHPDLFSLRVRS---LELYHQLVALVMAYSFQEPLEKEPNSPVMVPA----ADILNHLANHNANLEYSANTQPIPKGHEI------FNTYGQMANWQLIHMYFVEPYPDTADIQ-MVTVREAALQGTKTEAERHLVYERW-----DFLCKL--MVGEEGAFVIGREEVLT---EEELTTTLKVLCAEEFRELKDQKREEGSLTITNIPKLKASWRQ-----QNSVL-LTLQT------YATDL-GLLSNKEVYAK------------LSW-------REQQALQVRYGQKLH
8	SPARKS	3auxa	0.108	0.716	0.966	threading_8	LKEIRNNFKSHVNSRIKEKGIVAIIGENGSGKSSIFEAVFFALFGAGSNFNYDTIIT-KGKKSVYVELD---------FEVNG-------------------NNYKIIREYDSGRGGAKLYKNGKPYTISAVN---KAVN--EILGVDRNMFLNEIAKFLSLKPSEKLETVAKLL-GIDEFEKCYQKMGEIVKEYEKRLERIEKEKLTKFVE-------------YLDK-----VRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFDLP-YSFVELTKDFEVRVHAPNGVLT--IDNLSGGEQIAVALSLRL-----AIANALIGNRVE-CIILDEPTVYLDENRRAKLAEIFRKV------------KSIPQMIIIT---HHRELE----DVADVIINVKKDGNVSKVKING---------------------------------------------------
9	PROSPECT2	1p49A	0.079	0.897	1.188	threading_9	AAS-------------RPNIILVMARLASGGRAAFMTGRYPVRSGMASWSRTGVFLFT----------ASSGGLPTDEITFAKLLKDQWHLGMSCHSKTDF------------CHHPLHHGFN----YFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYCFMMRNYEIIQQPMSYDNLTQRLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLL--DELRLANDTLIYFTSDQGAHVE--EVSSKGEIHGGSNGIYKGGKANNWEGGI-----RVPGILRWPRVIQAGQKIDFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQRSDHEFLYCNAYLNAVRWHPQNSTSIWKAFFFTPNFNPVCFATHVCFCFGSYVTHHDPPLTPASEPRFYEILKVMQEAADRHTQ
10	PPA-I	1fnnA	0.113	0.645	0.989	threading_10	LQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTT---------------ARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEF--------LALLVEHLRERDLYMFLVLDDAFNLAPDILSIRLGQEAVLNNLDPSTRGIMGKYDQIFDILLDRAKAGLAEGSYSEDILQMIADITG----------------------------------------AQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFGISEEVLIGLPLHEKLFLLAIVRSLKISHTPYKIVCEEYGERPRVHETRQNTTLISIGTEPLDTLEAVITKLIKEELR------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.539 to 1w36E SCOP code=c.37.1.19	TM-score=0.680 to 1jx2B SCOP code=c.37.1.8	TM-score=0.691 to 1l5aA SCOP code=c.43.1.2	TM-score=0.720 to 1e9sF SCOP code=c.37.1.11	TM-score=0.627 to 1mqsA SCOP code=e.25.1.1