Template-based Modeling Results for PGMB_ECOLI

Submitted Primary Sequence

>Length 219
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCHHHCCEEEEHHHCCCCCCCCHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHCCHHHCCHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
350100000010000000200020022003402020223002202111132002200320233132323111200221121012003312222013002100210342401000001021011002103023001000002204313110200010031020213000001103100100210101000001212102201210320113202200341
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
1	MUSTER	2wheA	0.449	0.986	2.988	threading_1	M-FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINVDRQFNEQLKGVSREDSLQKILDLADK--KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPLGDDIVIVPDTSHYTLEFLKEVWLQK
2	SPARKS	3qu2a	0.207	0.973	3.473	threading_2	-KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRE-LGKEATQEEIESIYHEKSILF----NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW
3	PROSPECT2	3quqA	0.210	0.977	3.427	threading_3	HKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQREL-GKEATQEEIESIYHEKSILFNS----YPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLSMQTLCDSWDTL
4	PPA-I	2wheA	0.444	0.986	3.520	threading_4	-MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINVDRQFNEQLKGVSREDSLQKILDLADK--KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPLGDDIVIVPDTSHYTLEFLKEVWLQK
5	HHPRED-l	1swv_A	0.158	0.982	2.125	threading_5	-KIEAVIFAWAGTTVDYGCFPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRFRQLPTEADIQEMYEEFEEILFA--ILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMIVAKEAALQGYKDFLVTPDDVPAGRPYPWMCYKNAMELGVYPNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSERNRFVENGAHFTIETMQELMEH-
6	HHPRED-g	1te2_A	0.299	0.918	1.895	threading_6	RQILAAIFD-DGLLIDSEPLWDRAELDV-ASLGVDISRNELPDTLGLRID-VVDLWYARQPWN----GPSRQEVVERVIARAISLVEET--RPLLPGVREAVALCKEQGLLVGLASASP-LEKVLT-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNG-IASKAAR-RSIVVPAPFVLANVKLSSLTELTAKDLLG-----
7	SP3	3quqa	0.210	0.977	3.468	threading_7	MKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRE-LGKEATQEEIESIYHEKSILFNS----YPEAERMPGAWELLQKVKSEGLTPMVVTGSSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW
8	SAM-T99	2wheA	0.414	0.982	3.542	threading_8	-MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINVDRQFNEQLKGVSREDSLQKILDLADKKVSAEE--FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVW-
9	MUSTER	3quqA	0.206	0.977	2.701	threading_9	MRLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRE-LGKEATQEEIESIYHEKSILFNSY----PEAERMPGAWELLQKVKSEGLTPMVVTGSSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW
10	SPARKS	3quqa	0.210	0.977	3.468	threading_10	MKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRE-LGKEATQEEIESIYHEKSILFNS----YPEAERMPGAWELLQKVKSEGLTPMVVTGSSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW

Predicted Tertiary Structure


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TM-score=0.831 to 2hszA SCOP code=c.108.1.6	TM-score=0.829 to 2hszA SCOP code=c.108.1.6	TM-score=0.808 to 1te2A SCOP code=c.108.1.6	TM-score=0.782 to 2fdrA SCOP code=c.108.1.6	TM-score=0.829 to 2hszA SCOP code=c.108.1.6