Template-based Modeling Results for YCJS_ECOLI


  Submitted Primary Sequence

>Length 351
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCEEEEEEECCEEEEEEECCEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
553222212010000000200120002002313301000001132210220044021110011021003123010000000130002001100311110002201111131022002003522110000011211210210220034121120000001001411121200012322311000000000000000100223212000010012112232123113232221213100000010321000101000001243321010100032000101211011233221121232322332201100210020023432120313200100100100120133212022
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
1MUSTER2glxA0.2470.9232.737threading_1---------NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRPIAARVFHAVYLPPHLQGWRLERPEAGGGVILDITVHDADTLRFVLND-DPAEAVAISHS-------------AGMGKEGVEDGVMGVLRFQSGVIAQFHDAFTTKFAET---GFEVHGTEGSLIGRNVMTQKPVGTVTLRNAELPLDPANLYETALAAFHSAIEGHGQPSATGEDGVWSLATGLAVVKAAATGQAAEI
2SPARKS3q2ia0.2190.9493.584threading_2VIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIG--PVESVQAYTAT--------------LARNIEVEDTGTVSVKWRSGALGSMNVTML-TYPKNLEGSITILGEKGSVRVGGVIQHWEFSEPHAMDEEIKDASGFGHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSL
3PROSPECT22glxA0.2470.9234.574threading_3N---------RWGLIGASTIARE-WVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRPIAARVFHAVYLPPHLQGWRLERPEAGGGVILDITVHDADTLRFVLND-DPAEAVAISH-------------SAGMGKEGVEDGVMGVLRFQSGVIAQFHDAFTTKFAET---GFEVHGTEGSLIGRNVMTQKPVGTVTLRNAELPLDPANLYETALAAFHSAIEGHGQPSATGEDGVWSLATGLAVVKAAATGQAAEI
4PPA-I2glxA0.2470.9233.169threading_4---------NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRPIAARVFHAVYLPPHLQGWRLERPEAGGGVILDITVHDADTLRFVLNDD-PAEAVAISHS-------------AGMGKEGVEDGVMGVLRFQSGVIAQFHDAFTTKFAET---GFEVHGTEGSLIGRNVMTQKPVGTVTLRNAELPLDPANLYETALAAFHSAIEGHGQPSATGEDGVWSLATGLAVVKAAATGQAAEI
5HHPRED-l1h6d_A0.2400.9522.468threading_5IRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEE-PIEVRAYTYSDPND-----------ERFVEVEDRIIWQMRFRSGALSHGASSYST----TTTSRFSVQGDKAVLLMDPATGYVQTPGHANQSPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVN-
6HHPRED-g1h6d_A0.2390.9542.184threading_6IRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGE-EPIEVRAYTYSDPN-----------DERFVEVEDRIIWQMRFRSGALSHGASSYSTT----TTSRFSVQGDKAVLLMDPATGYYQGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNT
7SP33q2ia0.2270.9433.744threading_7VIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQDAAGWRGTWEF-DGGAFMNQASHYVDLLDWLIG--PVESVQAYTA--------------TLARNIEVEDTGTVSVKWRSGALGSMNVTMLT-YPKNLEGSITILGEKGSVRVGGVQHWEFSEPHAMDEEIKDA-SGFGHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSL
8SAM-T991h6dA0.2400.9492.823threading_8IRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVPRDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGE-EPIEVRAYTYSDPND-----------ERFVEVEDRIIWQMRFRSGALSHGASSYSTT----TTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPV--
9MUSTER3q2iA0.2290.9462.728threading_9VIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGAR-GHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEYAGWRGTWE-FDGGAFMNQASHYVDLLDWLIG--PVESVQAYTAT--------------LARNIEVEDTGTVSVKWRSGALGSMNVTM-LTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEESGFGHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSL
10SPARKS3moia0.1890.9343.285threading_10-------MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGI-PVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSMLNCFNYTDFLYRPRRPEELDTSKGGGIIYNQLPHQIDSIKTITGQ-RITAVRAMT--------------GRLDPKRPTEGNCAAMLTLEDGACAVMVYSGYDHFDSDEMHVMLVTCEHADLRASPEGVLVYGDEGVREVPAITGRGPFSQGDTIDELRDAIAGVAPALRDARWGKDTLEVCLAVLESSATGRQVER

  Predicted Tertiary Structure

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TM-score=0.861 to 1zh8A
SCOP code=c.2.1.3
TM-score=0.857 to 1zh8A
SCOP code=c.2.1.3
TM-score=0.860 to 1zh8A
SCOP code=c.2.1.3
TM-score=0.862 to 1zh8A
SCOP code=c.2.1.3
TM-score=0.860 to 1zh8A
SCOP code=c.2.1.3